HHsearch alignment for GI: 254780327 and conserved domain: PRK02362
>PRK02362 ski2-like helicase; Provisional.
Probab=96.97 E-value=0.024 Score=38.46 Aligned_cols=84 Identities=18% Similarity=0.151 Sum_probs=51.1
Q ss_pred CHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEE---CHHHHCCCH------HHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 0000134305489999987199679807899622430---203422377------8899999999999974099079861
Q gi|254780327|r 376 KLSGMTGTASTEAEELANIYNLDVIEVPTNVPVIRID---EHDEIYRTS------EEKYAAIIAEIIDSHKKGQPVLVGT 446 (890)
Q Consensus 376 kl~GmTGTa~te~~Ef~~iY~l~v~~iPtnkp~~r~d---~~d~v~~t~------~~k~~ai~~~i~~~~~~grpvLvgt 446 (890)
T Consensus 173 qiIgLSATl~-N~~~la~WL~a~~-~~s~~RPV~L~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~LVF~ 250 (736)
T PRK02362 173 QVIALSATIG-NADELAAWLDAEL-VDSEWRPVDLREGVFYGGAIHFKDTERELEVPSKDEDLNLVLDTLDEGGQCLVFV 250 (736)
T ss_pred EEEEEECCCC-CHHHHHHHHCCCC-CCCCCCCCCCEEEEEECCEECCCCCCCHHCCCCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf 3898624558-9999999838862-1589888675565650770103510030002564058999999997399069998
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 116789999999986
Q gi|254780327|r 447 PSIEKSEYLASQLRK 461 (890)
Q Consensus 447 ~sve~Se~ls~~L~~ 461 (890)
T Consensus 251 ~SR~~~e~~A~~la~ 265 (736)
T PRK02362 251 SSRRNAEAFAKRAAS 265 (736)
T ss_pred ECHHHHHHHHHHHHH
T ss_conf 249999999999987