HHsearch alignment for GI: 254780327 and conserved domain: PRK12898
>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=100.00 E-value=0 Score=2037.40 Aligned_cols=611 Identities=44% Similarity=0.663 Sum_probs=590.2
Q ss_pred HHHHHHHHHHHCCCHHHH----HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHH
Q ss_conf 568999999871885573----58999999999984228888389899999999999999-7399888966999999999
Q gi|254780327|r 2 LSHLAKLASKLLIPSNER----RLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERI-NNGETLDDLLVPAFAVVRE 76 (890)
Q Consensus 2 ~~~~~~~~~k~~~~~~~~----~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~-~~g~~l~~~l~eafa~~re 76 (890)
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~w~~~r~~~~~~~~~~~e~~~~~lsd~~L~a~t~~~~~rl~~~g~~ld~ll~eafA~vRE 109 (673)
T PRK12898 30 LERRDQAVDRLAGRKRGRQAGWATRRYARLARRVLARAEALASLSEDALRARLRALAARLRRRGLTDDALLAEAFALIRE 109 (673)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 23478999998563431311067899999999998307776627999999979999999986799678887999999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 95766087684479999999707945067336806899999999986079995697469277387599999999882943
Q gi|254780327|r 77 VARRTLGMRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYKFLGLS 156 (890)
Q Consensus 77 a~~R~lg~~~~dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~~lgls 156 (890)
T Consensus 110 a~~R~lg~r~ydvQliGg~~Lh~G~IaEM~TGEGKTL~atlpaylnAL~G~gVHvvTvNDYLA~RDae~mg~iy~fLGLs 189 (673)
T PRK12898 110 AAGRVLGMRHFPVQLMGGLALLEGWLAEMQTGEGKTLTATLPAGTAALAGRPVHVITVNDYLAERDAEQMRPLYEALGVT 189 (673)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCE
T ss_conf 98885389864689998999845843575078858999999999997369970898045577787699999999982977
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH-------------------CHHHHCCCCCCEEEEECCHHH
Q ss_conf 6763598798899740256353344343211122143200-------------------002210266743886120354
Q gi|254780327|r 157 TGVVFHDLSDDKRRAAYACDITYITNNELGFDYLRDNMQY-------------------RRVDMVQRGHNFAIVDEVDSI 217 (890)
Q Consensus 157 vg~~~~~~~~~~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~-------------------~~~~~v~r~~~~aivDEvDSi 217 (890)
T Consensus 190 vg~i~~~~~~~eRr~aY~~DItYgTn~E~GFDYLRDnm~~~~~~~~~~~~~~~l~~~~~~~~~~vqR~l~fAIVDEvDSI 269 (673)
T PRK12898 190 VGCVIEDQDPEERRAAYGADVTYCTNKELVFDYLRDRIALGQRAGDARLALESLRGGSERSGQLLLRGLHFAIVDEADSV 269 (673)
T ss_pred EEEECCCCCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCEEEEECHHHE
T ss_conf 84517999979999972699579565233245776413023343211111011013346677751356753787330331
Q ss_pred HHHHHCCCEEECCCCCCCH--HHHHHHHHHHHHHCCC-CEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 5643024215238876524--7878743454430135-514414444322014679999863101688452475760013
Q gi|254780327|r 218 FIDEARTPLIISGPVEDHS--DLYRTIDSIIIQLHPS-DYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENV 294 (890)
Q Consensus 218 LiDeartPLiIsg~~~~~~--~~~~~~~~~~~~l~~~-dy~id~~~~~v~lt~~G~~~~e~~~~~~~~~~~~~l~~~~~~ 294 (890)
T Consensus 270 LIDEARTPLIISgp~~~~~~~~~y~~a~~~~~~L~~~~dY~iDek~k~v~LTe~G~~~ie~~l~~~~------~~~~~~~ 343 (673)
T PRK12898 270 LIDEARTPLIISAPAKEEDGAAVLRRALALAAELQEGEDYRIDAATKQIELTEAGRARIAALAESLP------PAWRGAV 343 (673)
T ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCCC------CCCCCCH
T ss_conf 2102467610147777764089999999999856788877986688826578679999999724156------5565311
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 38999999999999852697316108937897554585156862112348999999730248431256643488998303
Q gi|254780327|r 295 AIVHLINNALKSHTLFLRNRDYIVNRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKY 374 (890)
Q Consensus 295 ~~~~~i~~al~A~~~~~~d~~Yiv~~~~v~ivDe~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y 374 (890)
T Consensus 344 ~~~~~i~~ALrA~~lf~rDvdYIV~dgeVvIVDEfTGR~m~GRrwsdGLHQAIEAKEgV~I~~e~qTlAsIT~QnfFR~Y 423 (673)
T PRK12898 344 RREELVRQALSALHLFRRDEHYIVRDGKVVIVDEFTGRVMPDRSWSDGLHQAIEAKEGVELTDPRETLARITFQRFFRRY 423 (673)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 48999999999999985798389978928998788885068880663789999985399878312356643499999856
Q ss_pred CCHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
Q ss_conf 20000134305489999987199679807899622430203422377889999999999997409907986111678999
Q gi|254780327|r 375 RKLSGMTGTASTEAEELANIYNLDVIEVPTNVPVIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSEY 454 (890)
Q Consensus 375 ~kl~GmTGTa~te~~Ef~~iY~l~v~~iPtnkp~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se~ 454 (890)
T Consensus 424 ~kLsGMTGTA~tea~Ef~~iY~L~Vv~IPTnrP~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~SE~ 503 (673)
T PRK12898 424 LRLAGMTGTAREVAGELWSVYGLPVVRIPTNRPSQRIVLPTEVFLTLAAKWAAVAARVRELHASGRPVLVGTRSVAASER 503 (673)
T ss_pred CHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 17405777857579999997599769868999730123798585699999999999999998679988998375899999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 99999860771022310224778888875305587048875024466554027675578886511357553008999999
Q gi|254780327|r 455 LASQLRKHKFTKFQILNALYHEKEAYIISQAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMI 534 (890)
Q Consensus 455 ls~~L~~~~~~~h~vLNAk~~~~Ea~Iia~AG~~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (890)
T Consensus 504 lS~~L~~~gi-~h~VLNAk~~~~EA~IIA~AG~~GaVTIATNMAGRGTDI~Lg~-------------------------- 556 (673)
T PRK12898 504 LSALLREAGL-PHQVLNAKQDAEEAAIVARAGQRGRITVATNMAGRGTDIKLEP-------------------------- 556 (673)
T ss_pred HHHHHHHCCC-CHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCH--------------------------
T ss_conf 9999998699-7566478666879999994399998797023678986847676--------------------------
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCC
Q ss_conf 99877643334540762799826775323355420543456686723899842301454202101344542100256662
Q gi|254780327|r 535 QEEVQSLKEKAIVAGGLYVISTERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESFLRKIGLKEGEA 614 (890)
Q Consensus 535 ~~~~~~~~~~v~~~GGL~VigterhesrRid~QlrGRagRQGdpG~s~f~~SleD~l~r~Fgsdri~~lm~klg~~egep 614 (890)
T Consensus 557 ---------~V~~~GGLhVIgTerheSrRIDnQLrGRsGRQGDPGss~f~lSleDdL~r~f~~~~~~~~~~~~~~~~~~~ 627 (673)
T PRK12898 557 ---------EVAARGGLHVILTERHESARIDRQLAGRCGRQGDPGSSEAILSLEDDLLQQFLPLLGRGIARALAAAQGPG 627 (673)
T ss_pred ---------HHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCC
T ss_conf ---------78862898898437551124565642354468999851489981467898757099999999818999984
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1456799999999987333467999999867777658888
Q gi|254780327|r 615 IIHPWINKAIERAQQKVEARNFETRKNLLKYDDVLNEQRK 654 (890)
Q Consensus 615 Ies~~itksIE~AQKkVE~~NFdiRK~LLeYDdVlN~QRe 654 (890)
T Consensus 628 i~~~~~~~~i~~aQ~kvE~~nf~~Rk~ll~yD~vln~~l~ 667 (673)
T PRK12898 628 LSRGLGAALLRSAQRRAERRHARARRQLLHADEQLDKLLS 667 (673)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 1108999999999999999859999888778999987415