HHsearch alignment for GI: 254780327 and conserved domain: PRK12899
>PRK12899 secA preprotein translocase subunit SecA; Reviewed.
Probab=100.00 E-value=0 Score=2444.13 Aligned_cols=806 Identities=43% Similarity=0.706 Sum_probs=736.0
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf 9999998718855735899999999998422888838989999999999999973998889669999999999576608-
Q gi|254780327|r 5 LAKLASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLDDLLVPAFAVVREVARRTLG- 83 (890)
Q Consensus 5 ~~~~~~k~~~~~~~~~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~~~g~~l~~~l~eafa~~rea~~R~lg- 83 (890)
T Consensus 1 Ml~~l~Kifgs~~~R~lKk~~~~v~kIn~lE~~~~~LSDeeLr~kT~efk~rl~~gesLd~iLpEAFAvvREa~~R~lG~ 80 (969)
T PRK12899 1 MLDFLKRFFGSSQERILKKFQKLVDKVNAYDEMLSPLSDDELRNKTAELKQRYQDGESLDKMLPEAYGVVKNVCRRLAGT 80 (969)
T ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 91678988499407679998999999998589998389999999899999999779987887589999999999986176
Q ss_pred ------------CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHH
Q ss_conf ------------76844799999997079450673368068999999999860799956974692773875999999998
Q gi|254780327|r 84 ------------MRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYK 151 (890)
Q Consensus 84 ------------~~~~dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~ 151 (890)
T Consensus 81 ~~~~~g~~~~w~mrhydVQliGgivLh~G~IAEM~TGEGKTLvAtlpayLnAL~GkgVHVVTVNDYLA~RDaewMg~iy~ 160 (969)
T PRK12899 81 PVEVSGYHQQWDMVPYDVQILGAIAMHKGFITEMQTGEGKTLTAVMPLYLNALTGKPVHLVTVNDYLAQRDCEWVGSVLR 160 (969)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHH
T ss_conf 54434333547777651799989998268413551788489999999999864599709972643656866999999999
Q ss_pred HHCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH-HHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCEEECC
Q ss_conf 829436763598798899740256353344343211122143-2000022102667438861203545643024215238
Q gi|254780327|r 152 FLGLSTGVVFHDLSDDKRRAAYACDITYITNNELGFDYLRDN-MQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISG 230 (890)
Q Consensus 152 ~lglsvg~~~~~~~~~~r~~~Y~~di~Y~t~~e~gfDyLrDn-m~~~~~~~v~r~~~~aivDEvDSiLiDeartPLiIsg 230 (890)
T Consensus 161 fLGLtVg~i~~~~~~~eRr~aY~~DItYgTn~E~GFDYLRDN~~a~~~~~~vqR~~~faIVDEvDSILIDEARTPLIISg 240 (969)
T PRK12899 161 WLGLTTGVLVSGSPLEKRKAIYQCDVVYGTASEFGFDYLRDNSIATRKEEQVGRGFYFAIIDEVDSILIDEARTPLIISG 240 (969)
T ss_pred HHCCEEEEECCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEC
T ss_conf 80977856389989899999866996787886667640137644268677517777446752331202304668658727
Q ss_pred CCCCCHHHHHHHHHHHHH--------------------------------------------------------------
Q ss_conf 876524787874345443--------------------------------------------------------------
Q gi|254780327|r 231 PVEDHSDLYRTIDSIIIQ-------------------------------------------------------------- 248 (890)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~-------------------------------------------------------------- 248 (890)
T Consensus 241 p~~~~~~~y~~~~~~v~~l~~~~~~~~~~~~~e~~~~l~~~~d~~~~~~~~~~~~~~~e~~~~l~l~~~g~~~~~~~~~~ 320 (969)
T PRK12899 241 PGEKHNPVYFELKDKVAELVYLQRELCNHIALEARRGLDPFLDMDILPKDKKVMEGISEFCRSLWLVSKGMPLNRVLRRV 320 (969)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 87665178898878888888888877667777765301211111111001111000245555555431255301345543
Q ss_pred -----------------------------HCCCCEEECCCCCCCCHHHHHHHH--------HHHHHHHC-----CCCCC-
Q ss_conf -----------------------------013551441444432201467999--------98631016-----88452-
Q gi|254780327|r 249 -----------------------------LHPSDYEIDEKQRTVHFSEKGTER--------IEELLHGE-----NLLKS- 285 (890)
Q Consensus 249 -----------------------------l~~~dy~id~~~~~v~lt~~G~~~--------~e~~~~~~-----~~~~~- 285 (890)
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~vdek~~~~~LTd~G~~~~~~~~~~~~~~f~~~d~~~~~~~i~~~ 400 (969)
T PRK12899 321 REHPDLRAMIDKWDVYYHAEQNKEESLEKLSSLYIIVDEHNNDFELTDKGMQQWVEKAGGSAEDFVMMDMGHEYALIEED 400 (969)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 01200344332223444332102221221023222013666724530505787766503306766521024555420243
Q ss_pred --------------CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf --------------475760013389999999999998526973161089378975545851568621123489999997
Q gi|254780327|r 286 --------------GGLYSFENVAIVHLINNALKSHTLFLRNRDYIVNRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKE 351 (890)
Q Consensus 286 --------------~~l~~~~~~~~~~~i~~al~A~~~~~~d~~Yiv~~~~v~ivDe~TGr~~~gr~~~~GlhQaieaKe 351 (890)
T Consensus 401 ~~l~~~~~~~~~~~~~~~~~~~~~~~h~i~qaLkA~~lf~kd~dYiV~d~~VvIVDEfTGR~m~gRr~sdGLHQAIEAKE 480 (969)
T PRK12899 401 ETLSPADKINRKIAVSEEDTQRKARAHGLRQLLRAHLLMERDVDYIVRDDQIVIIDEHTGRPQPGRRFSEGLHQAIEAKE 480 (969)
T ss_pred CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 33462555544210000012456889999999999998835980899789089985677765889845521889999873
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEECHHHHCCCHHHHHHHHHHH
Q ss_conf 30248431256643488998303200001343054899999871996798078996224302034223778899999999
Q gi|254780327|r 352 RVKIQPENQTLSSITFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVPTNVPVIRIDEHDEIYRTSEEKYAAIIAE 431 (890)
Q Consensus 352 ~v~i~~e~~t~a~it~qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~l~v~~iPtnkp~~r~d~~d~v~~t~~~k~~ai~~~ 431 (890)
T Consensus 481 gV~I~~e~qTlAsIT~QnfFR~Y~kLsGMTGTA~tea~Ef~~IY~L~Vv~IPTNrP~~R~D~~D~vy~T~~~K~~Avi~e 560 (969)
T PRK12899 481 HVTIRKESQTFATVTLQNFFRLYEKLAGMTGTAITESREFKEIYNLYVLQVPTFKPCLRIDHNDEFYMTEREKYHAIVNE 560 (969)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEECCCCEEECCHHHHHHHHHHH
T ss_conf 89867676136553699998305043068657476899999986883599679998212328883852899999999999
Q ss_pred HHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHH
Q ss_conf 99997409907986111678999999998607710223102247788888753055870488750244665540276755
Q gi|254780327|r 432 IIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNALYHEKEAYIISQAGIPGAVTIATNMAGRGTDIQLGGNVA 511 (890)
Q Consensus 432 i~~~~~~grpvLvgt~sve~Se~ls~~L~~~~~~~h~vLNAk~~~~Ea~Iia~AG~~g~vTiATNMAGRGTDI~Lgg~~~ 511 (890)
T Consensus 561 I~~~h~~GqPVLVGT~SVe~SE~lS~~L~~~gI-~H~VLNAK~h~~EAeIIA~AG~~GaVTIATNMAGRGTDIkL~---- 635 (969)
T PRK12899 561 IASIHRSGNPILIGTESVEVSEKLSRILRQNRI-EHTVLNAKNHAQEAEIIAGAGKLGAVTVATNMAGRGTDIKLD---- 635 (969)
T ss_pred HHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC-CHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC----
T ss_conf 999995799889983857999999999998699-645415111789999999559999779713267898583138----
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHH
Q ss_conf 78886511357553008999999998776433345407627998267753233554205434566867238998423014
Q gi|254780327|r 512 MRIEHELANISDEEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDL 591 (890)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GGL~VigterhesrRid~QlrGRagRQGdpG~s~f~~SleD~l 591 (890)
T Consensus 636 -------------------------------~~V~~lGGLhVIGTERHESRRIDnQLRGRaGRQGDPGsS~F~lSLEDdL 684 (969)
T PRK12899 636 -------------------------------EEAVAVGGLHVIGTSRHQSRRIDRQLRGRCARLGDPGAAKFFLSFEDRL 684 (969)
T ss_pred -------------------------------CCHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHH
T ss_conf -------------------------------1334338727852143401457767603313478998532676512689
Q ss_pred HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 54202101344542100256662145679999999998733346799999986777765888899999988640110189
Q gi|254780327|r 592 MRIFGSPRMESFLRKIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLLKYDDVLNEQRKIIFEQRLEIIDTENILE 671 (890)
Q Consensus 592 ~r~Fgsdri~~lm~klg~~egepIes~~itksIE~AQKkVE~~NFdiRK~LLeYDdVlN~QRevIY~qR~~IL~sedi~e 671 (890)
T Consensus 685 mR~Fgseri~~~m~~lg~~e~e~Ie~~~itk~Ie~AQkkVE~~nfdiRK~lLeYDdVmn~QR~vIY~~R~~iL~~edi~~ 764 (969)
T PRK12899 685 MRLFASPKLNTLIRHFRPPEGEAMSDPMFNRLIETAQKRVEGRNYTIRKHTLEYDDVMNKQRQTIYAFRNDVLHAEDVFD 764 (969)
T ss_pred HHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 98743177999998608999980453789999999999998503699998988888899999999999999870473789
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987777788776531278888221487889998888729988831032343899--8999999999999999999985
Q gi|254780327|r 672 IIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRNDNGID--HTEMSKRIFAKADKIAEDQENS 749 (890)
Q Consensus 672 ~I~~miedvI~diV~~~~~~~~~~eeWDle~L~~~L~~~f~~~~~~~e~~~~~~ld--~eeI~e~I~~~~~~~y~~K~e~ 749 (890)
T Consensus 765 ~i~~~i~~~~~-~i~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~e~i~~~l~~~~~~~~~~~~~~ 843 (969)
T PRK12899 765 LAKEQIEHVSL-MLASLIMSDAHADGCSLPNLEEWLSYSFPIKLNIEELRRLKDVDAIAEKIADELIEAFQVKFSSMVEE 843 (969)
T ss_pred HHHHHHHHHHH-HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999-99986113368310358889999987557778989986344545789999999999999999999999
Q ss_pred ---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---------19898999999999999996579999999988775335554010624899999999999999999999999
Q gi|254780327|r 750 ---------FGTEKMQALGRHILLHTLDSFWREHMARLEHSRSIIGFRGYAQRDPLQEYKSEAFGFFNTLLTHLRKDVVS 820 (890)
Q Consensus 750 ---------lg~e~~~elER~IlLq~ID~~WkEHL~~MD~LRqgIgLRaYGQKDPL~EYKkEAF~LFeeMl~~Ik~evV~ 820 (890)
T Consensus 844 ~~~~~~e~~~~~~~~~~~er~i~L~~iD~~W~eHL~~Md~LR~~IgLR~ygQkdPl~EYk~E~f~mF~~ml~~I~~~~v~ 923 (969)
T PRK12899 844 FTEAIGEALDAQGICRDILRSVMIMHIDEQWKIHLVDMDLLRSEVGLRTVGQKDPLIEFKHESFLLFESLIRDIRIAIVK 923 (969)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99876665302789999999999999999999999999999877653034237989999999999999999999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 985231575106778764333210011
Q gi|254780327|r 821 QIARIEPNNINNQELNNSLPYIAENDH 847 (890)
Q Consensus 821 ~L~riqi~~~e~qe~~~~~~~~~~~~~ 847 (890)
T Consensus 924 ~Lf~v~i~~~~~~~~~~~~~~~~~~~~ 950 (969)
T PRK12899 924 HLFRLELTLTRSDRPDNVIPTVATSFH 950 (969)
T ss_pred HHEEEEECCCCCCCCCCCCCCHHHCCC
T ss_conf 842898358777763224851554157