HHsearch alignment for GI: 254780327 and conserved domain: PRK12903
>PRK12903 secA preprotein translocase subunit SecA; Reviewed.
Probab=100.00 E-value=0 Score=2401.45 Aligned_cols=776 Identities=44% Similarity=0.730 Sum_probs=745.5
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99987188557358999999999984228888389899999999999999739988896699999999995766087684
Q gi|254780327|r 8 LASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLDDLLVPAFAVVREVARRTLGMRPF 87 (890)
Q Consensus 8 ~~~k~~~~~~~~~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~~~g~~l~~~l~eafa~~rea~~R~lg~~~~ 87 (890)
T Consensus 3 ~~k-l~-~~~~r~lk~~~~~v~~In~le~~~~~LsD~eL~~kT~efk~rl~~ge~ld~il~eafA~vrEa~~R~lg~r~y 80 (885)
T PRK12903 3 FLK-LI-SPKSRELRIAEKILKQINDLEPYYRALTDEELANKTNEFKDRLKNGESLEDIRVEAFAVAREATKRVLGKRPY 80 (885)
T ss_pred CHH-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 301-16-9767899998999999998579998379999999999999999779987888599999999999986189863
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH
Q ss_conf 47999999970794506733680689999999998607999569746927738759999999988294367635987988
Q gi|254780327|r 88 DVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDLSDD 167 (890)
Q Consensus 88 dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~~lglsvg~~~~~~~~~ 167 (890)
T Consensus 81 dvQl~gg~~l~~G~iaEM~TGEGKTL~atlp~ylnal~g~gvhvvTvNdYLA~RDae~m~~~y~~lGltvg~~~~~~~~~ 160 (885)
T PRK12903 81 DVQIIGGIILDLGSVAEMKTGEGKTITSIAPVYLNALEGKGVIVSTVNEYLAERDAEEMGKVFKFLGLSVGINKANMDPN 160 (885)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHH
T ss_conf 78999899984595146506885799999999998746998089806456558559999999998296560118999979
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 99740256353344343211122143200002210266743886120354564302421523887652478787434544
Q gi|254780327|r 168 KRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGPVEDHSDLYRTIDSIII 247 (890)
Q Consensus 168 ~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiDeartPLiIsg~~~~~~~~~~~~~~~~~ 247 (890)
T Consensus 161 ~r~~aY~~ditY~tn~e~gFDyLrDnm~~~~~~~vqr~~~~aIvDEvDSiLIDeArtPLiisg~~~~~~~~y~~~~~~~~ 240 (885)
T PRK12903 161 LKREAYNCDITYSTHSELGFDYLRDNMVSSYEEKVQRGLNFCLIDEVDSILIDEARTPLIISGGKSNESNLYKAADQFVR 240 (885)
T ss_pred HHHHHHCCCCEEECCCCEEECCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf 99998569967977865030114001135837725889980366541144330467752576789886469999999865
Q ss_pred HHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE
Q ss_conf 30135514414444322014679999863101688452475760013389999999999998526973161089378975
Q gi|254780327|r 248 QLHPSDYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENVAIVHLINNALKSHTLFLRNRDYIVNRDEVVIID 327 (890)
Q Consensus 248 ~l~~~dy~id~~~~~v~lt~~G~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~A~~~~~~d~~Yiv~~~~v~ivD 327 (890)
T Consensus 241 ~l~~~dy~id~~~~~v~lte~G~~~~e~~~~~~~------l~~~~~~~~~~~i~~al~A~~l~~~d~dYiV~d~~v~ivD 314 (885)
T PRK12903 241 TLEEDDYKIDEESKAIYLTEKGIKKANKFFKLDN------LYAIENSELFHRIQNALRAHKVFKEGVEYIVRDGKIELVD 314 (885)
T ss_pred HCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCC------CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEE
T ss_conf 3365668863144776425115899998426644------4661157999999999999999856970799779289987
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 54585156862112348999999730248431256643488998303200001343054899999871996798078996
Q gi|254780327|r 328 EFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVPTNVP 407 (890)
Q Consensus 328 e~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~l~v~~iPtnkp 407 (890)
T Consensus 315 e~TGR~m~grr~s~GLhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~l~v~~iPtn~p 394 (885)
T PRK12903 315 QFTGRIMEGRSYSEGLQQAIQAKEMVEIEPETKTLATITYQNFFRLFKKLSGMTGTAKTEEQEFIDIYNMRVNVVPTNKP 394 (885)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCC
T ss_conf 89886278880303689999987288779887313663099898646042267677788999999986973698189998
Q ss_pred EEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 22430203422377889999999999997409907986111678999999998607710223102247788888753055
Q gi|254780327|r 408 VIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNALYHEKEAYIISQAGI 487 (890)
Q Consensus 408 ~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se~ls~~L~~~~~~~h~vLNAk~~~~Ea~Iia~AG~ 487 (890)
T Consensus 395 ~~R~d~~d~vy~t~~~k~~av~~ei~~~~~~gqPvLvgt~sve~Se~ls~~L~~~~i-~h~vLNAk~~~~EA~Iia~AG~ 473 (885)
T PRK12903 395 VIRKDEPDSIFGTKHAKWKAVVKEVKRVHEKGQPILIGTAQVEDSEQLHEYLLEANI-PHTVLNAKQHAREAEIIAKAGQ 473 (885)
T ss_pred CEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCC-CCEEEECCCHHHHHHHHHHCCC
T ss_conf 521428323107899999999999999985799889956847999999999985687-7035546865889999995489
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 87048875024466554027675578886511357553008999999998776433345407627998267753233554
Q gi|254780327|r 488 PGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESRRIDNQ 567 (890)
Q Consensus 488 ~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GGL~VigterhesrRid~Q 567 (890)
T Consensus 474 ~g~VTiATNMAGRGTDI~Lg-----------------------------------~~v~~~GGL~VigterhesrRiD~Q 518 (885)
T PRK12903 474 KGAITIATNMAGRGTDIKLS-----------------------------------KGVLELGGLYVLGTEKAESRRIDNQ 518 (885)
T ss_pred CCCEEEECCCCCCCCCCCCC-----------------------------------HHHHHCCCEEEEECCCCCCHHHHHH
T ss_conf 99189837667899685741-----------------------------------6589729858984265620458888
Q ss_pred HCCCCCCCCCCCCEEEEEECCCHHHHHHCC-HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 205434566867238998423014542021-0134454210025666214567999999999873334679999998677
Q gi|254780327|r 568 LRGRSGRQGDPGRSKFYLSLQDDLMRIFGS-PRMESFLRKIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLLKYD 646 (890)
Q Consensus 568 lrGRagRQGdpG~s~f~~SleD~l~r~Fgs-dri~~lm~klg~~egepIes~~itksIE~AQKkVE~~NFdiRK~LLeYD 646 (890)
T Consensus 519 LrGR~gRQGDpG~s~f~~SleD~lmr~F~~~~~~~~~~~~~~---~e~IEhkmISKsIE~AQKKVEg~NFDIRKnLLEYD 595 (885)
T PRK12903 519 LRGRSGRQGDVGESRFFISLDDQLFRRFANFDKIKEAFKKLG---DDAIKSKFFSRALTNAQKKIEGFNFDMRKNVLDYD 595 (885)
T ss_pred HCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHHHHHHCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 607434689997359999726489997457999998861134---67766778999999999999987299999898888
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCH-HHHHHHCC
Q ss_conf 77658888999999886401101899998777778877653127888822148788999888872998883-10323438
Q gi|254780327|r 647 DVLNEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHFPV-LEWRNDNG 725 (890)
Q Consensus 647 dVlN~QRevIY~qR~~IL~sedi~e~I~~miedvI~diV~~~~~~~~~~eeWDle~L~~~L~~~f~~~~~~-~e~~~~~~ 725 (890)
T Consensus 596 DVLN~QRkVIY~qRneIL~~eDl~eiI~~mie~vVe~ivd~~~~~-~~~~~~d~e~L~e~L~~~l~~~~~~~~~~edl~~ 674 (885)
T PRK12903 596 DVIRQQRELIYAQRDLILLADDLSEVIEKMITRAVEQIVKYSKII-LNENTINYKALIEFLNKELSRITHFKFTAKDFEN 674 (885)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHCC
T ss_conf 999999999999999987056279999999999999999853246-8823227789999999986341576578787716
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 9989999999999999999999851----989899999999999999657999999998877533555401062489999
Q gi|254780327|r 726 IDHTEMSKRIFAKADKIAEDQENSF----GTEKMQALGRHILLHTLDSFWREHMARLEHSRSIIGFRGYAQRDPLQEYKS 801 (890)
Q Consensus 726 ld~eeI~e~I~~~~~~~y~~K~e~l----g~e~~~elER~IlLq~ID~~WkEHL~~MD~LRqgIgLRaYGQKDPL~EYKk 801 (890)
T Consensus 675 ~~~eel~e~L~e~~~e~Y~~K~e~l~e~~g~ei~~~~ER~IlLqvID~~WkEHL~~MD~LRegIgLRsYGQKDPL~EYKk 754 (885)
T PRK12903 675 YTKEDLVQKLIELLMEIYKKKIQVLTDKNGGKIALNSERKIILSTLDKYWQNHIDTMDKLRSGVNLVQYSQKNPLQVYTE 754 (885)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 88889999999999999999998753112699999999999999999999999999999998876655602798999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 999999999999999999998523157510
Q gi|254780327|r 802 EAFGFFNTLLTHLRKDVVSQIARIEPNNIN 831 (890)
Q Consensus 802 EAF~LFeeMl~~Ik~evV~~L~riqi~~~e 831 (890)
T Consensus 755 EAFeLFe~Ml~~Ik~eVVk~LFN~~~~~~~ 784 (885)
T PRK12903 755 EGTKLFNKLLQKIAYDVIVNLFNNILAEKS 784 (885)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 999999999999999999998289986400