HHsearch alignment for GI: 254780327 and conserved domain: PRK12904
>PRK12904 preprotein translocase subunit SecA; Reviewed.
Probab=100.00 E-value=0 Score=2644.22 Aligned_cols=831 Identities=59% Similarity=0.946 Sum_probs=817.0
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999987188557358999999999984228888389899999999999999739988896699999999995766087
Q gi|254780327|r 5 LAKLASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLDDLLVPAFAVVREVARRTLGM 84 (890)
Q Consensus 5 ~~~~~~k~~~~~~~~~l~~~~~~~~~in~~e~~~~~lsd~~l~~~t~~~~~~~~~g~~l~~~l~eafa~~rea~~R~lg~ 84 (890)
T Consensus 1 ~~~~~~k~~g~~~~r~lk~~~~~v~~In~le~~~~~lsD~eL~~kt~~fk~rl~~ge~ld~~l~eafA~vrea~~R~lg~ 80 (833)
T PRK12904 1 MGGLLKKIFGSRNDRELKRLRKIVDKINALEPEMEKLSDEELKAKTAEFKERLANGETLDDLLPEAFAVVREASKRVLGM 80 (833)
T ss_pred CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 94678987599018789999999999998489988389999999999999999779987888799999999998986589
Q ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 68447999999970794506733680689999999998607999569746927738759999999988294367635987
Q gi|254780327|r 85 RPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNALSGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDL 164 (890)
Q Consensus 85 ~~~dvQl~g~~~l~~g~iaem~TGEGKTL~a~l~~~lnal~g~~vhvvTvNdyLA~RDa~~m~~~y~~lglsvg~~~~~~ 164 (890)
T Consensus 81 ~~~dvQl~gg~~l~~g~iaEM~TGEGKTL~atlp~ylnal~g~gvhvvTvNdYLA~RDa~~m~~~~~~lGltvg~i~~~~ 160 (833)
T PRK12904 81 RHFDVQLIGGMVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGPLYNFLGLSVGVILSGM 160 (833)
T ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf 76478999899994695246506885899999999999736998199815557778779999999998197880438999
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCCCCCEEEEECCHHHHHHHHCCCEEECCCCCCCHHHHHHHHH
Q ss_conf 98899740256353344343211122143200002210266743886120354564302421523887652478787434
Q gi|254780327|r 165 SDDKRRAAYACDITYITNNELGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGPVEDHSDLYRTIDS 244 (890)
Q Consensus 165 ~~~~r~~~Y~~di~Y~t~~e~gfDyLrDnm~~~~~~~v~r~~~~aivDEvDSiLiDeartPLiIsg~~~~~~~~~~~~~~ 244 (890)
T Consensus 161 ~~~~r~~aY~~ditY~tn~e~gFDyLrDnm~~~~~~~v~r~~~~aivDE~DSiLiDeArtPLiisg~~~~~~~~y~~~~~ 240 (833)
T PRK12904 161 SPEERREAYAADITYGTNNEFGFDYLRDNMVFSLEDRVQRGLNYAIVDEVDSILIDEARTPLIISGPAEDSSELYKRANK 240 (833)
T ss_pred CHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCHHHEEECCCCCEEEECCCCCCHHHHHHHHH
T ss_conf 83999998637713412543245412555437889875012572688641132013267773886788777799999999
Q ss_pred HHHHHCCC-CEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCE
Q ss_conf 54430135-51441444432201467999986310168845247576001338999999999999852697316108937
Q gi|254780327|r 245 IIIQLHPS-DYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENVAIVHLINNALKSHTLFLRNRDYIVNRDEV 323 (890)
Q Consensus 245 ~~~~l~~~-dy~id~~~~~v~lt~~G~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~A~~~~~~d~~Yiv~~~~v 323 (890)
T Consensus 241 ~~~~l~~~~dy~~d~~~~~v~lt~~G~~~~e~~~~~~~------ly~~~~~~~~~~i~~al~A~~l~~~d~dYiV~d~~v 314 (833)
T PRK12904 241 FVPTLKKEGDYTVDEKSRTVGLTEEGIEKAEKLLGIEN------LYDPENIALVHHVNQALRAHYLFKRDVDYIVKDGEV 314 (833)
T ss_pred HHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCC------CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCEE
T ss_conf 99974787867995155775314526999998506566------578432369998899999999985687079887907
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEEC
Q ss_conf 89755458515686211234899999973024843125664348899830320000134305489999987199679807
Q gi|254780327|r 324 VIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLSSITFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVP 403 (890)
Q Consensus 324 ~ivDe~TGr~~~gr~~~~GlhQaieaKe~v~i~~e~~t~a~it~qn~Fr~y~kl~GmTGTa~te~~Ef~~iY~l~v~~iP 403 (890)
T Consensus 315 ~ivDe~TGR~m~grr~~~GlhQaiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~klsGMTGTa~te~~Ef~~iY~l~V~~IP 394 (833)
T PRK12904 315 VIVDEFTGRLMPGRRYSDGLHQAIEAKEGVKIQNENQTLASITFQNYFRMYEKLAGMTGTADTEAEEFREIYNLDVVVIP 394 (833)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEECC
T ss_conf 99866777626787065477999999848877888700123029889832755135677867789999998688769858
Q ss_pred CCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89962243020342237788999999999999740990798611167899999999860771022310224778888875
Q gi|254780327|r 404 TNVPVIRIDEHDEIYRTSEEKYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNALYHEKEAYIIS 483 (890)
Q Consensus 404 tnkp~~r~d~~d~v~~t~~~k~~ai~~~i~~~~~~grpvLvgt~sve~Se~ls~~L~~~~~~~h~vLNAk~~~~Ea~Iia 483 (890)
T Consensus 395 tn~p~~R~d~~d~iy~t~~~K~~ai~~ei~~~~~~gqPvLvGT~sve~SE~ls~~L~~~~i-~h~vLNAk~~~~EA~Iia 473 (833)
T PRK12904 395 TNRPMIRIDHPDLIYKTEKEKFDAVVEDIKERHKKGQPVLVGTTSIEKSELLSKLLKKAGI-PHNVLNAKNHEREAEIIA 473 (833)
T ss_pred CCCCCEEEECCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCC-CHHHCCCCHHHHHHHHHH
T ss_conf 9998543608870207999999999999999997699789942747989999999987378-277617736666889999
Q ss_pred HCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
Q ss_conf 30558704887502446655402767557888651135755300899999999877643334540762799826775323
Q gi|254780327|r 484 QAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKEKAIVAGGLYVISTERHESRR 563 (890)
Q Consensus 484 ~AG~~g~vTiATNMAGRGTDI~Lgg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GGL~VigterhesrR 563 (890)
T Consensus 474 ~AG~~gaVTiATNMAGRGTDI~LGGn~e~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~GGL~VigterhesrR 547 (833)
T PRK12904 474 QAGRPGAVTIATNMAGRGTDIKLGGNPEMLAAGLE------DETEEQIAKIKAEWQKEHEEVLEAGGLHVIGTERHESRR 547 (833)
T ss_pred HCCCCCCEEEEECCCCCCCCEECCCCHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH
T ss_conf 55999976874025678868216886334444320------014667888888876533778863892798514333466
Q ss_pred HHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35542054345668672389984230145420210134454210025666214567999999999873334679999998
Q gi|254780327|r 564 IDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESFLRKIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLL 643 (890)
Q Consensus 564 id~QlrGRagRQGdpG~s~f~~SleD~l~r~Fgsdri~~lm~klg~~egepIes~~itksIE~AQKkVE~~NFdiRK~LL 643 (890)
T Consensus 548 iD~QLrGR~GRQGDpG~s~f~lSleDdLmr~Fg~~~i~~~~~~lg~~e~e~Ie~~~v~k~Ie~AQkkVE~~nfdiRK~LL 627 (833)
T PRK12904 548 IDNQLRGRSGRQGDPGSSRFYLSLEDDLMRIFGSDRVKGMMDRLGMKEGEAIEHKMVTRAIENAQKKVEGRNFDIRKNLL 627 (833)
T ss_pred HHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78786122145689985326541208999986567799988643898876153176899999999998761199999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 67777658888999999886401101899998777778877653127888822148788999888872998883103234
Q gi|254780327|r 644 KYDDVLNEQRKIIFEQRLEIIDTENILEIIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRND 723 (890)
Q Consensus 644 eYDdVlN~QRevIY~qR~~IL~sedi~e~I~~miedvI~diV~~~~~~~~~~eeWDle~L~~~L~~~f~~~~~~~e~~~~ 723 (890)
T Consensus 628 eYDDVLN~QRevIY~qR~~IL~sedi~e~I~~mied~Ie~iV~~~~~~~~~~eeWdle~L~~~l~~~f~~~~~~~~~~~~ 707 (833)
T PRK12904 628 EYDDVMNDQRKVIYAQRNEILEAEDLSETILDMREDVIEDLVDAYIPPESYEEQWDLEGLEEALKNDFGLDLPIEEWLEE 707 (833)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 76789999999999999998504208999999999999999998568765721216999999999971888985666543
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 38998999999999999999999985198989999999999999965799999999887753355540106248999999
Q gi|254780327|r 724 NGIDHTEMSKRIFAKADKIAEDQENSFGTEKMQALGRHILLHTLDSFWREHMARLEHSRSIIGFRGYAQRDPLQEYKSEA 803 (890)
Q Consensus 724 ~~ld~eeI~e~I~~~~~~~y~~K~e~lg~e~~~elER~IlLq~ID~~WkEHL~~MD~LRqgIgLRaYGQKDPL~EYKkEA 803 (890)
T Consensus 708 ~~~~~eelk~~L~~~~~~~Y~~K~~~ig~e~~~e~ER~IlL~~ID~~WkeHL~~MD~LRegIgLRaYGQKDPL~EYKrEa 787 (833)
T PRK12904 708 EGLDEEELRERILEAAEEAYEEKEELVGPEAMREFEKVVMLQVLDSKWREHLAAMDHLRQGIGLRGYAQKDPLQEYKREG 787 (833)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 37999999999999999999999986399999999999999999999999999999999775553106569899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999999999999985231575106778764333210011211111244567876679986899989989997311
Q gi|254780327|r 804 FGFFNTLLTHLRKDVVSQIARIEPNNINNQELNNSLPYIAENDHGPVIQKENELDTPNVCKTSKIKRNHPCPCGSGKKYK 883 (890)
Q Consensus 804 F~LFeeMl~~Ik~evV~~L~riqi~~~e~qe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KVGRNDPCPCGSGKKYK 883 (890)
T Consensus 788 f~lFeeMl~~Ir~evV~~L~rv~-----------------------------------------I~~ne~CPCGSGKKYK 826 (833)
T PRK12904 788 FELFEEMLDSIKEEVVRTLMKVQ-----------------------------------------IQSEEECPCGSGKKYK 826 (833)
T ss_pred HHHHHHHHHHHHHHHHHHHHEEE-----------------------------------------CCCCCCCCCCCCCHHH
T ss_conf 99999999999999999987104-----------------------------------------4899999998896675
Q ss_pred CCCCCC
Q ss_conf 245889
Q gi|254780327|r 884 HCHGSY 889 (890)
Q Consensus 884 ~ChGan 889 (890)
T Consensus 827 ~C~Gr~ 832 (833)
T PRK12904 827 HCHGKL 832 (833)
T ss_pred HCCCCC
T ss_conf 269999