HHsearch alignment for GI: 254780327 and conserved domain: smart00488

Probab=90.98  E-value=0.4  Score=28.56  Aligned_cols=37  Identities=35%  Similarity=0.451  Sum_probs=23.7

Q ss_pred             CCCHHHHHHHHH----HCCCC--EEEECCCCCHHHHHHHHHHHH
Q ss_conf             684479999999----70794--506733680689999999998
Q gi|254780327|r   85 RPFDVQLLGGMI----LHKGC--VAEMKTGEGKTLAAVLPVYLN  122 (890)
Q Consensus        85 ~~~dvQl~g~~~----l~~g~--iaem~TGEGKTL~a~l~~~ln  122 (890)
T Consensus         8 ~py~~Q~e~m~~v~~~l~~~~~~llEaPTGtGKTla-lL~~al~   50 (289)
T smart00488        8 EPYPIQYEFMEELKRVLDRGKIGILESPTGTGKTLS-LLCLTLT   50 (289)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH-HHHHHHH
T ss_conf             999899999999999997499799989996518999-9999999