RPSBLAST alignment for GI: 254780327 and conserved domain: COG0653
>gnl|CDD|30998 COG0653, SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion]. Length = 822
Score = 996 bits (2576), Expect = 0.0
Identities = 463/880 (52%), Positives = 587/880 (66%), Gaps = 59/880 (6%)
Query: 5 LAKLASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLD 64
L L KL NER L+ V+ IN LE E+ LSD+ L KT+EFKER+ +GE LD
Sbjct: 1 LFSLLKKLFGSGNERILKRLRKIVMQINALEAEMESLSDEELKAKTNEFKERLASGE-LD 59
Query: 65 DLLVPAFAVVREVARRTLGMRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNAL 124
DLL AFAVVRE ++R LGMR FDVQLLGG++LH G +AEM+TGEGKTL A LP YLNAL
Sbjct: 60 DLLPEAFAVVREASKRVLGMRHFDVQLLGGIVLHLGDIAEMRTGEGKTLVATLPAYLNAL 119
Query: 125 SGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDLSDDKRRAAYACDITYITNNE 184
+GKGVHVVTVNDYLARRD+ M +Y+FLGLS GV+ +S +++RAAYACDITY TNNE
Sbjct: 120 AGKGVHVVTVNDYLARRDAEWMGPLYEFLGLSVGVILAGMSPEEKRAAYACDITYGTNNE 179
Query: 185 LGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGPVEDHSDLYRTIDS 244
LGFDYLRDNM + + VQRG NFAIVDEVDSI IDEARTPLIISGP ED S+LY+ +D
Sbjct: 180 LGFDYLRDNMVTSQEEKVQRGLNFAIVDEVDSILIDEARTPLIISGPAEDSSELYKKVDD 239
Query: 245 IIIQLHP-SDYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENVAIVHLINNA 303
++ L D+ IDEK + V +E G E+ EELL EN LY ENV +VH +N A
Sbjct: 240 LVRLLSEDEDFTIDEKSKNVSLTESGLEKAEELLGIEN------LYDLENVNLVHHLNQA 293
Query: 304 LKSHTLFLRNRDYIVNRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLS 363
L++H LF R+ DYIV EVVI+DEFTGRMM GRR+SDG HQA+EAKE V+IQ ENQTL+
Sbjct: 294 LRAHILFFRDVDYIVRDGEVVIVDEFTGRMMEGRRWSDGLHQAIEAKEGVEIQEENQTLA 353
Query: 364 SITFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVPTNVPVIRIDEHDEIYRTSEE 423
+ITFQN F Y KL+GMTGTA TE EE IY LDV+ +PTN P+IR+DE D +Y+T EE
Sbjct: 354 TITFQNLFRLYPKLAGMTGTADTEEEEFDVIYGLDVVVIPTNRPIIRLDEPDLVYKTEEE 413
Query: 424 KYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNALYHEKEAYIIS 483
K+ AI+ +I + H+KGQPVLVGT SIEKSE L+ LRK +LNA H +EA II+
Sbjct: 414 KFKAIVEDIKERHEKGQPVLVGTVSIEKSELLSKLLRKAGI-PHNVLNAKNHAREAEIIA 472
Query: 484 QAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKE 543
QAG PGAVTIATNMAGRGTDI+LGGN E
Sbjct: 473 QAGQPGAVTIATNMAGRGTDIKLGGNP--------------------------------E 500
Query: 544 KAIVAGGLYVISTERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESF 603
+ GGL+VI TERHESRRIDNQLRGR+GRQGDPG S+FYLSL+DDLMR F S R+ +
Sbjct: 501 FVMELGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRRFASDRLPAL 560
Query: 604 LRKIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLLKYDDVLNEQRKIIFEQRLEI 663
+ K+GLKEGEAI + +A+ERAQ+KVE RNF+ RK LL+YDDVLN+QRK+I+ QR +
Sbjct: 561 MDKLGLKEGEAIESKMVTRAVERAQRKVEGRNFDIRKQLLEYDDVLNDQRKVIYAQRNRL 620
Query: 664 IDTENILEIIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRND 723
++ ++ E I+ M D + +V + IP E WD++ L E+ P+ + +
Sbjct: 621 LEALDLSEFISKMIEDVIKALVGEYIPPPQQAELWDLEGLIDELKGTVHPDLPINKSDLE 680
Query: 724 NGIDHTEMSKRIFAKADKIAEDQENSFGTEKMQALGRHILLHTLDSFWREHMARLEHSRS 783
+ E+++RI AD+ + +E G E M+ R+++L LD WREH+ ++ R
Sbjct: 681 DE-AEEELAERILKAADEAYDKKEE-VGPEAMREFERYVMLQVLDYLWREHLDAMDALRE 738
Query: 784 IIGFRGYAQRDPLQEYKSEAFGFFNTLLTHLRKDVVSQIARIEPNNINNQELNNSLPYIA 843
I RGYAQ+DPL EYK EAF F +L +++DVV ++ +++ + ++ +
Sbjct: 739 GIHLRGYAQKDPLIEYKREAFELFEDMLEDIKEDVVKRLFKVQVAEVEEEDRSLLA---- 794
Query: 844 ENDHGPVIQKENELDTPNVCKTSKIKRNHPCPCGSGKKYK 883
+ + L KI RN PCPCGSG KYK
Sbjct: 795 ---QEKALTQARALG--------KIGRNEPCPCGSG-KYK 822