RPSBLAST alignment for GI: 254780327 and conserved domain: COG0653

>gnl|CDD|30998 COG0653, SecA, Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion]. Length = 822
 Score =  996 bits (2576), Expect = 0.0
 Identities = 463/880 (52%), Positives = 587/880 (66%), Gaps = 59/880 (6%)

Query: 5   LAKLASKLLIPSNERRLRPYYAKVIAINELEKEISHLSDDSLANKTSEFKERINNGETLD 64
           L  L  KL    NER L+     V+ IN LE E+  LSD+ L  KT+EFKER+ +GE LD
Sbjct: 1   LFSLLKKLFGSGNERILKRLRKIVMQINALEAEMESLSDEELKAKTNEFKERLASGE-LD 59

Query: 65  DLLVPAFAVVREVARRTLGMRPFDVQLLGGMILHKGCVAEMKTGEGKTLAAVLPVYLNAL 124
           DLL  AFAVVRE ++R LGMR FDVQLLGG++LH G +AEM+TGEGKTL A LP YLNAL
Sbjct: 60  DLLPEAFAVVREASKRVLGMRHFDVQLLGGIVLHLGDIAEMRTGEGKTLVATLPAYLNAL 119

Query: 125 SGKGVHVVTVNDYLARRDSNTMSAIYKFLGLSTGVVFHDLSDDKRRAAYACDITYITNNE 184
           +GKGVHVVTVNDYLARRD+  M  +Y+FLGLS GV+   +S +++RAAYACDITY TNNE
Sbjct: 120 AGKGVHVVTVNDYLARRDAEWMGPLYEFLGLSVGVILAGMSPEEKRAAYACDITYGTNNE 179

Query: 185 LGFDYLRDNMQYRRVDMVQRGHNFAIVDEVDSIFIDEARTPLIISGPVEDHSDLYRTIDS 244
           LGFDYLRDNM   + + VQRG NFAIVDEVDSI IDEARTPLIISGP ED S+LY+ +D 
Sbjct: 180 LGFDYLRDNMVTSQEEKVQRGLNFAIVDEVDSILIDEARTPLIISGPAEDSSELYKKVDD 239

Query: 245 IIIQLHP-SDYEIDEKQRTVHFSEKGTERIEELLHGENLLKSGGLYSFENVAIVHLINNA 303
           ++  L    D+ IDEK + V  +E G E+ EELL  EN      LY  ENV +VH +N A
Sbjct: 240 LVRLLSEDEDFTIDEKSKNVSLTESGLEKAEELLGIEN------LYDLENVNLVHHLNQA 293

Query: 304 LKSHTLFLRNRDYIVNRDEVVIIDEFTGRMMPGRRYSDGQHQALEAKERVKIQPENQTLS 363
           L++H LF R+ DYIV   EVVI+DEFTGRMM GRR+SDG HQA+EAKE V+IQ ENQTL+
Sbjct: 294 LRAHILFFRDVDYIVRDGEVVIVDEFTGRMMEGRRWSDGLHQAIEAKEGVEIQEENQTLA 353

Query: 364 SITFQNYFLKYRKLSGMTGTASTEAEELANIYNLDVIEVPTNVPVIRIDEHDEIYRTSEE 423
           +ITFQN F  Y KL+GMTGTA TE EE   IY LDV+ +PTN P+IR+DE D +Y+T EE
Sbjct: 354 TITFQNLFRLYPKLAGMTGTADTEEEEFDVIYGLDVVVIPTNRPIIRLDEPDLVYKTEEE 413

Query: 424 KYAAIIAEIIDSHKKGQPVLVGTPSIEKSEYLASQLRKHKFTKFQILNALYHEKEAYIIS 483
           K+ AI+ +I + H+KGQPVLVGT SIEKSE L+  LRK       +LNA  H +EA II+
Sbjct: 414 KFKAIVEDIKERHEKGQPVLVGTVSIEKSELLSKLLRKAGI-PHNVLNAKNHAREAEIIA 472

Query: 484 QAGIPGAVTIATNMAGRGTDIQLGGNVAMRIEHELANISDEEIRNKRIKMIQEEVQSLKE 543
           QAG PGAVTIATNMAGRGTDI+LGGN                                 E
Sbjct: 473 QAGQPGAVTIATNMAGRGTDIKLGGNP--------------------------------E 500

Query: 544 KAIVAGGLYVISTERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSPRMESF 603
             +  GGL+VI TERHESRRIDNQLRGR+GRQGDPG S+FYLSL+DDLMR F S R+ + 
Sbjct: 501 FVMELGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRRFASDRLPAL 560

Query: 604 LRKIGLKEGEAIIHPWINKAIERAQQKVEARNFETRKNLLKYDDVLNEQRKIIFEQRLEI 663
           + K+GLKEGEAI    + +A+ERAQ+KVE RNF+ RK LL+YDDVLN+QRK+I+ QR  +
Sbjct: 561 MDKLGLKEGEAIESKMVTRAVERAQRKVEGRNFDIRKQLLEYDDVLNDQRKVIYAQRNRL 620

Query: 664 IDTENILEIIADMRHDTLHNIVEKCIPNNSYPEKWDIKKLETEIYEIFGIHFPVLEWRND 723
           ++  ++ E I+ M  D +  +V + IP     E WD++ L  E+        P+ +   +
Sbjct: 621 LEALDLSEFISKMIEDVIKALVGEYIPPPQQAELWDLEGLIDELKGTVHPDLPINKSDLE 680

Query: 724 NGIDHTEMSKRIFAKADKIAEDQENSFGTEKMQALGRHILLHTLDSFWREHMARLEHSRS 783
           +     E+++RI   AD+  + +E   G E M+   R+++L  LD  WREH+  ++  R 
Sbjct: 681 DE-AEEELAERILKAADEAYDKKEE-VGPEAMREFERYVMLQVLDYLWREHLDAMDALRE 738

Query: 784 IIGFRGYAQRDPLQEYKSEAFGFFNTLLTHLRKDVVSQIARIEPNNINNQELNNSLPYIA 843
            I  RGYAQ+DPL EYK EAF  F  +L  +++DVV ++ +++   +  ++ +       
Sbjct: 739 GIHLRGYAQKDPLIEYKREAFELFEDMLEDIKEDVVKRLFKVQVAEVEEEDRSLLA---- 794

Query: 844 ENDHGPVIQKENELDTPNVCKTSKIKRNHPCPCGSGKKYK 883
                  + +   L         KI RN PCPCGSG KYK
Sbjct: 795 ---QEKALTQARALG--------KIGRNEPCPCGSG-KYK 822