HHsearch alignment for GI: 254780328 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=99.97 E-value=1.8e-30 Score=207.67 Aligned_cols=277 Identities=18% Similarity=0.191 Sum_probs=200.4
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH-CCCCEEEEECCCHHHHHHHHHHCCCCEEEECHHHCCCC
Q ss_conf 47999687882779999999987988999926876752130-23867984268999999998756988999571440112
Q gi|254780328|r 4 KNVLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAEFV-LWGPLEQVDICDYTNLRAVFAKYQPASVMHFAGLTNIS 82 (333)
Q Consensus 4 kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~~~~Di~d~~~l~~~~~~~~~d~ViHlAa~~~~~ 82 (333)
T Consensus 1 M~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~gDl~dpesl~~Al~Gv--daVi~~~~~~--- 75 (319)
T CHL00194 1 MSLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVYGDLSLPETIPPALEGI--TAIIDASTSR--- 75 (319)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCC--CEEEEECCCC---
T ss_conf 97999899858999999999968890899957867632342159679994278877899996599--6799945667---
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23431001233012333222112222222222223333222222222222222222222222222233322222222222
Q gi|254780328|r 83 ESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKVNG 162 (333)
Q Consensus 83 ~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~ 162 (333)
T Consensus 76 --~~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga---~----------~~~~~p~~~~K~~~E~~L----~~Sg 136 (319)
T CHL00194 76 --PSDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNA---E----------QYPQVPLMKIKSDIEEKL----KQSG 136 (319)
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC---C----------CCCCCHHHHHHHHHHHHH----HHCC
T ss_conf --78862088988988999999999849988999613566---6----------688756778799999999----8679
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 22222222222222222222223333322222222222222222222222222222322110011111000000011100
Q gi|254780328|r 163 LRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIHVLDLANAHIMALEYL 242 (333)
Q Consensus 163 ~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~ 242 (333)
T Consensus 137 l~~TIlRPs~F~q~---------------l~~~~a~pi~~~-~~--v~~~-----~~~~~ia~I~~~DVA~~~a~aL~~~ 193 (319)
T CHL00194 137 INYTIFRLAGFFQG---------------LISQYAIPILDS-QT--IWIT-----GESTPIAYIDTQDAAKFALKSLSLP 193 (319)
T ss_pred CCEEEECCHHHHHH---------------HHHHHHHHHHCC-CC--EEEC-----CCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 98599847399998---------------899876776307-85--7766-----9987528877999999999995897
Q ss_pred CCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCEEECCCCC----------CC-------------C----CEEEECH
Q ss_conf 2358731036417998029999999999837898759857898----------88-------------6----2221270
Q gi|254780328|r 243 INQGDSIAINLGTGTGITVKEIISTIQSMYECAFPITYESRRI----------GD-------------P----PSLVADN 295 (333)
Q Consensus 243 ~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~~~~i~~~~~~~----------~~-------------~----~~~~~d~ 295 (333)
T Consensus 194 ~--~~gk~y~L~GP~a~T~~EIa~l~~~~~Gk~~~i~~vP~~~~~~~~~~~~~f~~~~~i~~rl~f~ev~~~~~~~~~~~ 271 (319)
T CHL00194 194 E--TKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKVTRIPLFLLKLLRRITGFFEWTWNISDRLAFAEVLSEGNNFSASM 271 (319)
T ss_pred C--CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 7--58989995498638999999999998599987786898999999999987233425999999999965598657888
Q ss_pred HHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 89999818876--10799999999999997242200
Q gi|254780328|r 296 KKAKKILGWNP--KYKLRDIIESAWNWHLKYPRSLS 329 (333)
Q Consensus 296 ~k~~~~LGw~p--~~~leegi~~~i~~~~~~~~~~~ 329 (333)
T Consensus 272 ~~~~~~~~~~~~~~~~le~y~~ey~~~il~~l~~~~ 307 (319)
T CHL00194 272 ADVYKIFKIDSNEITSLEDYLQEYFGRILKRLKEIN 307 (319)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 999877188922222189999999999999998612