HHsearch alignment for GI: 254780328 and conserved domain: COG1086
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=100.00 E-value=1.6e-40 Score=269.80 Aligned_cols=252 Identities=22% Similarity=0.254 Sum_probs=211.2
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCC----HHH-----HCCCCEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 9644799968788277999999998798-899992687675----213-----023867984268999999998756988
Q gi|254780328|r 1 MENKNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSGH----AEF-----VLWGPLEQVDICDYTNLRAVFAKYQPA 70 (333)
Q Consensus 1 m~~kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~~----~~~-----~~~~~~~~~Di~d~~~l~~~~~~~~~d 70 (333)
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCC
T ss_conf 07988999689873679999999854987899961763779999999986278751689963534689999998638886
Q ss_pred EEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99957144011223431001233012333222112222222222223333222222222222222222222222222233
Q gi|254780328|r 71 SVMHFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVV 150 (333)
Q Consensus 71 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~ 150 (333)
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------AV~PtNvmGaTKr~a 393 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------AVNPTNVMGATKRLA 393 (588)
T ss_pred EEEEHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC--------------CCCCCHHHHHHHHHH
T ss_conf 688755553686310188999987217389999999983977899970586--------------668841766889999
Q ss_pred CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32222222222---222222222222222222222223333322222222222222222222222222222322110011
Q gi|254780328|r 151 ERELLQHNKVN---GLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIH 227 (333)
Q Consensus 151 E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~Rdfi~ 227 (333)
T Consensus 394 E~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG------------SViPlFk~QI~~G-gplTvT-------dp~mtRyfMT 453 (588)
T COG1086 394 EKLFQAANRNVSGTGTRFCVVRFGNVLGSRG------------SVIPLFKKQIAEG-GPLTVT-------DPDMTRFFMT 453 (588)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEECCEECCCC------------CCHHHHHHHHHCC-CCCCCC-------CCCCEEEEEE
T ss_conf 9999997410488885799998254545887------------7778899999759-984546-------8670567888
Q ss_pred CCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHC----CCCCEEECCCCCCCCC
Q ss_conf 1110000000111002358731036417998029999999999837----8987598578988862
Q gi|254780328|r 228 VLDLANAHIMALEYLINQGDSIAINLGTGTGITVKEIISTIQSMYE----CAFPITYESRRIGDPP 289 (333)
Q Consensus 228 v~D~~~a~~~~~~~~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g----~~~~i~~~~~~~~~~~ 289 (333)
T Consensus 454 I~EAv~LVlqA~a---~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGEKl 516 (588)
T COG1086 454 IPEAVQLVLQAGA---IAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGEKL 516 (588)
T ss_pred HHHHHHHHHHHHH---HCCCCCEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHH
T ss_conf 9999999999875---06898589981899727999999999981779988877699855875314