HHsearch alignment for GI: 254780328 and conserved domain: KOG1200
>KOG1200 consensus.
Probab=98.57 E-value=9e-08 Score=67.28 Aligned_cols=201 Identities=17% Similarity=0.146 Sum_probs=119.6
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH---C---CCCEEEEECCCHHHHHHHHHHC-----CCC
Q ss_conf 6447999687882779999999987988999926876752130---2---3867984268999999998756-----988
Q gi|254780328|r 2 ENKNVLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAEFV---L---WGPLEQVDICDYTNLRAVFAKY-----QPA 70 (333)
Q Consensus 2 ~~kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~~~---~---~~~~~~~Di~d~~~l~~~~~~~-----~~d 70 (333)
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred HCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 46224873487507799999997469679975032244799986268877652353046757889999999998429972
Q ss_pred EEEECHHHCCCC----CCCCCCEEEEEECCCCCCCCCCCCCCC----CCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999571440112----234310012330123332221122222----222--2222333322222222222222222222
Q gi|254780328|r 71 SVMHFAGLTNIS----ESVKNPSLFYEINIKGSFNLIATAIES----NVR--RFIFSSTCATYGIPHNTIITENDPQESI 140 (333)
Q Consensus 71 ~ViHlAa~~~~~----~~~~~p~~~~~~Nv~gt~~ll~~~~~~----~~~--~~i~~SS~~vYG~~~~~~~~E~~~~~p~ 140 (333)
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI--VGkiGN~---------GQ 161 (256)
T KOG1200 93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI--VGKIGNF---------GQ 161 (256)
T ss_pred EEEECCCCCCCCCEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH--HCCCCCC---------CC
T ss_conf 899757646530201324888888997512136788899999999716798438864452--1024565---------52
Q ss_pred CCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222222333222222222---222222222222222222222222333332222222222222222222222222222
Q gi|254780328|r 141 TPYGYTKYVVERELLQHNKV---NGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATR 217 (333)
Q Consensus 141 ~~Yg~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~ 217 (333)
T Consensus 162 tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpM-----------T~~mp~~v~~ki~~-~iP----------- 218 (256)
T KOG1200 162 TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPM-----------TEAMPPKVLDKILG-MIP----------- 218 (256)
T ss_pred HHHHHHCCCEEEEEHHHHHHHHHCCCEEEEECCCCCCCHH-----------HHHCCHHHHHHHHC-CCC-----------
T ss_conf 2344532755530098899886548247676143116812-----------54438789999975-587-----------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 23221100111110000000111
Q gi|254780328|r 218 DGTCLRDYIHVLDLANAHIMALE 240 (333)
Q Consensus 218 dg~~~Rdfi~v~D~~~a~~~~~~ 240 (333)
T Consensus 219 ----mgr~G~~EevA~~V~fLAS 237 (256)
T KOG1200 219 ----MGRLGEAEEVANLVLFLAS 237 (256)
T ss_pred ----CCCCCCHHHHHHHHHHHHC
T ss_conf ----6445888998789998815