HHsearch alignment for GI: 254780328 and conserved domain: KOG4288

Probab=98.87  E-value=1.8e-10  Score=83.98  Aligned_cols=145  Identities=25%  Similarity=0.279  Sum_probs=82.5

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             01233012333222112222222222223333222222222222222222222222222233322222222222222222
Q gi|254780328|r   89 SLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKVNGLRSVVL  168 (333)
Q Consensus        89 ~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~~~  168 (333)
T Consensus       132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~-d~~~~---------~~i~r-GY~~gKR~AE~Ell~---~~~~rgiil  197 (283)
T KOG4288         132 ILMDRINGTANINAVKAAAKAGVPRFVYISAH-DFGLP---------PLIPR-GYIEGKREAEAELLK---KFRFRGIIL  197 (283)
T ss_pred             HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEHH-HCCCC---------CCCCH-HHHCCCHHHHHHHHH---HCCCCCEEE
T ss_conf             79998613766888999997499639998754-32798---------86622-130431688999997---427886264


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf             2222222222222222333332222222222----222222222222222222232211001111100000001110023
Q gi|254780328|r  169 RYFNAAGATLDSIIGEWHNPETHVIPLAIKT----AMGYQNSFKVFGQDYATRDGTCLRDYIHVLDLANAHIMALEYLIN  244 (333)
Q Consensus       169 R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~----~~~~~~~i~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~  244 (333)
T Consensus       198 RPGFiyg~R~v~--g~~--~pL~~vg~pl~~~~~~a~k~~~kLp~lg--------~l~~ppvnve~VA~aal~ai~dp~f  265 (283)
T KOG4288         198 RPGFIYGTRNVG--GIK--SPLHTVGEPLEMVLKFALKPLNKLPLLG--------PLLAPPVNVESVALAALKAIEDPDF  265 (283)
T ss_pred             CCCEEECCCCCC--CCC--CCHHHHHHHHHHHHHHHHCHHHCCCCCC--------CCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             353021455467--602--4087634269999874023122075556--------4247986789999999974248775


Q ss_pred             CCCCCEEEEECCCCEEHHHHHHHHHH
Q ss_conf             58731036417998029999999999
Q gi|254780328|r  245 QGDSIAINLGTGTGITVKEIISTIQS  270 (333)
Q Consensus       245 ~~~~~~~Nig~~~~~si~~l~~~i~~  270 (333)
T Consensus       266 ~-----------Gvv~i~eI~~~a~k  280 (283)
T KOG4288         266 K-----------GVVTIEEIKKAAHK  280 (283)
T ss_pred             C-----------CEEEHHHHHHHHHH
T ss_conf             7-----------60559999998887