HHsearch alignment for GI: 254780328 and conserved domain: PRK05294
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=93.24 E-value=0.57 Score=25.23 Aligned_cols=146 Identities=18% Similarity=0.221 Sum_probs=77.0
Q ss_pred CCCEEEEECCCC----------HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHC-----CCCEEEEECCCHHHHHHHHHH
Q ss_conf 644799968788----------27799999999879889999268767521302-----386798426899999999875
Q gi|254780328|r 2 ENKNVLVVGGAG----------YIGAHTCRVLYERGFLPIVLDNLSSGHAEFVL-----WGPLEQVDICDYTNLRAVFAK 66 (333)
Q Consensus 2 ~~kkIlItG~tG----------fiGs~l~~~L~~~g~~v~~~d~~~~~~~~~~~-----~~~~~~~Di~d~~~l~~~~~~ 66 (333)
T Consensus 552 ~~~kvlvlGsGp~rIGqgiEFDY~~v~a~~alk~~G~~~imIN~----NPETVSTD~d~sDrLYF-Eplt~E~V~~I~~~ 626 (1063)
T PRK05294 552 DRKKVMILGGGPNRIGQGIEFDYCCVHAALALREAGYETIMVNC----NPETVSTDYDTSDRLYF-EPLTLEDVLEIIEK 626 (1063)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC----CCCCCCCCCCCCCEEEE-CCCCHHHHHHHHHH
T ss_conf 88637996577732044423006799999999965981589537----81111156566761454-36889999999997
Q ss_pred CCCC-EEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCC
Q ss_conf 6988-999571440112234310012330123332221122222222222233332222222----22222222222222
Q gi|254780328|r 67 YQPA-SVMHFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPH----NTIITENDPQESIT 141 (333)
Q Consensus 67 ~~~d-~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~----~~~~~E~~~~~p~~ 141 (333)
T Consensus 627 E~p~gvi~qfGGQt~~nla-------------------~~L~~~g~~-ilGts~~~Id~aEDR~~F~~~l~~l~i~qp~~ 686 (1063)
T PRK05294 627 EKPKGVIVQFGGQTPLKLA-------------------KALEAAGVP-ILGTSPDAIDLAEDRERFQKLLEKLGIKQPPN 686 (1063)
T ss_pred HCCCEEEEECCCCCHHHHH-------------------HHHHHCCCC-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 5898799973883678999-------------------999987994-77788788787875888999998659999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222222233322222222222222222222222222
Q gi|254780328|r 142 PYGYTKYVVERELLQHNKVNGLRSVVLRYFNAAGAT 177 (333)
Q Consensus 142 ~Yg~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 177 (333)
T Consensus 687 ~~a~s~~e----a~~~a~~iGyP-vlvRPSyVLGG~ 717 (1063)
T PRK05294 687 GTATSVEE----ALEIAEEIGYP-VLVRPSYVLGGR 717 (1063)
T ss_pred CEECCHHH----HHHHHHHCCCC-EEECCCCCCCCC
T ss_conf 07668999----99999864986-684343102577