HHsearch alignment for GI: 254780328 and conserved domain: PRK08643

Probab=99.45  E-value=1.3e-14  Score=109.49  Aligned_cols=226  Identities=17%  Similarity=0.112  Sum_probs=140.2

Q ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH----H---CCCCEEEEECCCHHHHHHHHHHC-----CC
Q ss_conf             644799968788277999999998798899992687675213----0---23867984268999999998756-----98
Q gi|254780328|r    2 ENKNVLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAEF----V---LWGPLEQVDICDYTNLRAVFAKY-----QP   69 (333)
Q Consensus         2 ~~kkIlItG~tGfiGs~l~~~L~~~g~~v~~~d~~~~~~~~~----~---~~~~~~~~Di~d~~~l~~~~~~~-----~~   69 (333)
T Consensus         1 mnKvalVTGg~~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   80 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAKAAADKLSSDGGKAIAVKADVSNRDQVFDAVQQVVDTFGDL   80 (256)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             98499995757889999999999879999999698899999999998539909999805899999999999999982998


Q ss_pred             CEEEECHHHCCCC----CCCCCCEEEEEECCCCCCCCCCCCC----CCC-CCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf             8999571440112----2343100123301233322211222----222-2222223333222-2222222222222222
Q gi|254780328|r   70 ASVMHFAGLTNIS----ESVKNPSLFYEINIKGSFNLIATAI----ESN-VRRFIFSSTCATY-GIPHNTIITENDPQES  139 (333)
Q Consensus        70 d~ViHlAa~~~~~----~~~~~p~~~~~~Nv~gt~~ll~~~~----~~~-~~~~i~~SS~~vY-G~~~~~~~~E~~~~~p  139 (333)
T Consensus        81 DiLVNnAG~~~~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~~~m~~~~~~G~IVnisS~~~~~~~~------------~  148 (256)
T PRK08643         81 NVVVNNAGLAPTTPIDTITEEQFKKVYGINVGGVIWGIQAAQEQFKKLGHGGKIINATSQAGVEGNP------------G  148 (256)
T ss_pred             CEEEECCCCCCCCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCCC------------C
T ss_conf             7999899889998825599999999999976368999999999999828992799983210135899------------8


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC
Q ss_conf             2222222223332222222222---222222222222222222222223333322222222222222-222222222222
Q gi|254780328|r  140 ITPYGYTKYVVERELLQHNKVN---GLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGY-QNSFKVFGQDYA  215 (333)
Q Consensus       140 ~~~Yg~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~i~i~g~~~~  215 (333)
T Consensus       149 ~~~Y~asKaav~~ltkslA~ela~~gIrVN~V~PG~i~T~~~~~---------------~~~~~~~~~~~~~~-~~-~~~  211 (256)
T PRK08643        149 LSVYGSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD---------------IAHEVGENAGKPDE-WG-MEQ  211 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHH---------------HHHHHHHHCCCCHH-HH-HHH
T ss_conf             48999999999999999999987759189999606688704566---------------77887876289758-99-999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECC
Q ss_conf             22232211001111100000001110023587310364179
Q gi|254780328|r  216 TRDGTCLRDYIHVLDLANAHIMALEYLINQGDSIAINLGTG  256 (333)
Q Consensus       216 ~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~Nig~~  256 (333)
T Consensus       212 ~~~~ipl~R~g~pedia~~v~fL~S~~s~~iTG~~i~VDGG  252 (256)
T PRK08643        212 FAKDITLKRLSEPEDVANVVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEECCC
T ss_conf             98359999986899999999999593536935875996638