HHsearch alignment for GI: 254780328 and conserved domain: PRK08644

>PRK08644 thiamine biosynthesis protein ThiF; Provisional.
Probab=96.70  E-value=0.0018  Score=40.66  Aligned_cols=121  Identities=15%  Similarity=0.176  Sum_probs=56.8

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC--CCCCCHHHHCCCCEEEEECCC--HHHHHHHHHHCCCCEEEEC
Q ss_conf             9644799968788277999999998798-8999926--876752130238679842689--9999999875698899957
Q gi|254780328|r    1 MENKNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDN--LSSGHAEFVLWGPLEQVDICD--YTNLRAVFAKYQPASVMHF   75 (333)
Q Consensus         1 m~~kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~--~~~~~~~~~~~~~~~~~Di~d--~~~l~~~~~~~~~d~ViHl   75 (333)
T Consensus        25 L~~s~VlivG~GG-LG~~~a~~La~aGVG~i~lvD~D~Ve~SN-L~RQ-~-~~~~diG~~Ka~~a~~~l~~iNp~v~I~~  100 (209)
T PRK08644         25 LKKAKVGIAGAGG-LGSNIAVALARSGVGNLKLVDFDVVEPSN-LNRQ-Q-YFISQIGMFKVEALKENLLRINPFVKIEV  100 (209)
T ss_pred             HHCCCEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCEECCCC-CCCC-C-CCHHHCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             9629689988878-89999999999389818998899901541-1037-5-67877597569999999874489828999


Q ss_pred             HHHCCCCCCCC----CCEEEE--EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             14401122343----100123--301233322211222222222222333322222
Q gi|254780328|r   76 AGLTNISESVK----NPSLFY--EINIKGSFNLIATAIESNVRRFIFSSTCATYGI  125 (333)
Q Consensus        76 Aa~~~~~~~~~----~p~~~~--~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~  125 (333)
T Consensus       101 ~~~~l~~~n~~~l~~~~DiViDctDN~~tR~li~~~c~~~~~~plV~as~i~g~g~  156 (209)
T PRK08644        101 HQVKIDEDNIEELFKDCDIVVEAFDNAETKAMLVETVLEKKGKKVVSASGMAGYGD  156 (209)
T ss_pred             EECCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
T ss_conf             72248989999998579999999999999999999999977996899961215757