HHsearch alignment for GI: 254780328 and conserved domain: PRK10217
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional.
Probab=100.00 E-value=0 Score=476.10 Aligned_cols=308 Identities=27% Similarity=0.409 Sum_probs=267.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHH-------HHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 4799968788277999999998798-89999268767521-------302386798426899999999875698899957
Q gi|254780328|r 4 KNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSGHAE-------FVLWGPLEQVDICDYTNLRAVFAKYQPASVMHF 75 (333)
Q Consensus 4 kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~~~~-------~~~~~~~~~~Di~d~~~l~~~~~~~~~d~ViHl 75 (333)
T Consensus 2 KkILVTGg~GFIGs~Lv~~Ll~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~~pD~ViHl 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEYQPDCVMHL 81 (355)
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 96999378757999999999976998899982898765254444541278716998005889999999986199889994
Q ss_pred HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC---------CCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCC
Q ss_conf 144011223431001233012333222112222---------222222223333222222--222222222222222222
Q gi|254780328|r 76 AGLTNISESVKNPSLFYEINIKGSFNLIATAIE---------SNVRRFIFSSTCATYGIP--HNTIITENDPQESITPYG 144 (333)
Q Consensus 76 Aa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~---------~~~~~~i~~SS~~vYG~~--~~~~~~E~~~~~p~~~Yg 144 (333)
T Consensus 82 Aa~~~~~~s~~~p~~~~~~N~~gt~~lleaar~~~~~l~~~~~~~~~~~~~SS~~vYG~~~~~~~~~~E~~~~~P~s~Yg 161 (355)
T PRK10217 82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS 161 (355)
T ss_pred CCCCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 24221101211967754303075789999999977544330366148886554200367778888767788889998889
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22223332222222222222222222222222222222223333322222222222222222222222222222322110
Q gi|254780328|r 145 YTKYVVERELLQHNKVNGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRD 224 (333)
Q Consensus 145 ~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~Rd 224 (333)
T Consensus 162 ~sK~~~E~l~~~~~~~~gl~~~i~R~~nvYGP~~~~---------~~~i~~~i~~~~~g-~~i~i~G------~G~q~Rd 225 (355)
T PRK10217 162 ASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP---------EKLIPLMILNALAG-KPLPVYG------NGQQIRD 225 (355)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCC---------CHHHHHHHHHHHCC-CCCCCCC------CCCEEEE
T ss_conf 998766554355554158876972357557919998---------40499999999749-9886279------9982897
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHC------------CCCCEEECCCCCCCCCEEE
Q ss_conf 0111110000000111002358731036417998029999999999837------------8987598578988862221
Q gi|254780328|r 225 YIHVLDLANAHIMALEYLINQGDSIAINLGTGTGITVKEIISTIQSMYE------------CAFPITYESRRIGDPPSLV 292 (333)
Q Consensus 225 fi~v~D~~~a~~~~~~~~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g------------~~~~i~~~~~~~~~~~~~~ 292 (333)
T Consensus 226 f~yV~D~v~a~~~~~~~~---~~ge~yNiG~g~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~i~~~~~rp~~~~~~~ 302 (355)
T PRK10217 226 WLYVEDHARALYCVATTG---KVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYA 302 (355)
T ss_pred EEEHHHHHHHHHHHHHCC---CCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCEEE
T ss_conf 585899999999999669---99997997999962079999999999997623566554443455156799999985632
Q ss_pred ECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 27089999818876107999999999999972422001
Q gi|254780328|r 293 ADNKKAKKILGWNPKYKLRDIIESAWNWHLKYPRSLSN 330 (333)
Q Consensus 293 ~d~~k~~~~LGw~p~~~leegi~~~i~~~~~~~~~~~~ 330 (333)
T Consensus 303 ~D~ska~~~LGw~P~~sleeGl~~ti~Wy~~n~~~~~~ 340 (355)
T PRK10217 303 IDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQ 340 (355)
T ss_pred ECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 28899999849988999999999999999988999987