HHsearch alignment for GI: 254780328 and conserved domain: TIGR03589

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=100.00  E-value=0  Score=323.31  Aligned_cols=247  Identities=21%  Similarity=0.226  Sum_probs=204.9

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCCCC--HH---HHCCCCEEEEECCCHHHHHHHHHHCCCCEEE
Q ss_conf             964479996878827799999999879--8899992687675--21---3023867984268999999998756988999
Q gi|254780328|r    1 MENKNVLVVGGAGYIGAHTCRVLYERG--FLPIVLDNLSSGH--AE---FVLWGPLEQVDICDYTNLRAVFAKYQPASVM   73 (333)
Q Consensus         1 m~~kkIlItG~tGfiGs~l~~~L~~~g--~~v~~~d~~~~~~--~~---~~~~~~~~~~Di~d~~~l~~~~~~~~~d~Vi   73 (333)
T Consensus         2 ~~~K~ILVTGGaGfIGS~lv~~Ll~~~~~~~iii~~~de~~~~~l~~~~~~~~i~f~~gDIrD~~~l~~~~~~--vD~Vf   79 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG--VDYVV   79 (324)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCC--CCEEE
T ss_conf             9939999907977999999999997299828999668640328898516898759996777788999976348--88999


Q ss_pred             ECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             57144011223431001233012333222112222222222223333222222222222222222222222222233322
Q gi|254780328|r   74 HFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSSTCATYGIPHNTIITENDPQESITPYGYTKYVVERE  153 (333)
Q Consensus        74 HlAa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG~~~~~~~~E~~~~~p~~~Yg~sK~~~E~~  153 (333)
T Consensus        80 HaAA~khVp~se~nP~e~i~tNV~Gt~nlleaa~~~~Vkk~V~iSTDka--------------~~P~n~yGasK~~~E~l  145 (324)
T TIGR03589        80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKL  145 (324)
T ss_pred             ECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC--------------CCCCCCCCCCHHHHHHH
T ss_conf             9462776726776989999999799999999988555431786226888--------------89967431236767999


Q ss_pred             CC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             22---222222222222222222222222222223333322222222222222222222222222222322110011111
Q gi|254780328|r  154 LL---QHNKVNGLRSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAIKTAMGYQNSFKVFGQDYATRDGTCLRDYIHVLD  230 (333)
Q Consensus       154 ~~---~~~~~~~~~~~~~R~~~vyGp~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~i~i~g~~~~~~dg~~~Rdfi~v~D  230 (333)
T Consensus       146 ~~~~~~~~~~~~~~~~~vRygNV~gsrg------------SViP~F~~qi~~g~~~~~i-------td~~mtRf~mtv~d  206 (324)
T TIGR03589       146 FVAANNISGSKGTRFSVVRYGNVVGSRG------------SVVPFFKSLKEEGVTELPI-------TDPRMTRFWITLEQ  206 (324)
T ss_pred             HHHHHHHHCCCCCEEEEEEECCCCCCCC------------CCHHHHHHHHHCCCCCCCC-------CCCCEEEEEEEHHH
T ss_conf             9999985078886378863327518886------------6399999999839997444-------99980799888999


Q ss_pred             CCCCCHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCEEECCCCCCCCCE
Q ss_conf             000000011100235873103641799802999999999983789875985789888622
Q gi|254780328|r  231 LANAHIMALEYLINQGDSIAINLGTGTGITVKEIISTIQSMYECAFPITYESRRIGDPPS  290 (333)
Q Consensus       231 ~~~a~~~~~~~~~~~~~~~~~Nig~~~~~si~~l~~~i~~~~g~~~~i~~~~~~~~~~~~  290 (333)
T Consensus       207 av~lV~~a~~~---~~~GEifv~-k~~s~~i~dla~~~~----~~~~~k~iG~RpGEKl~  258 (324)
T TIGR03589       207 GVNFVLKSLER---MLGGEIFVP-KIPSMKITDLAEAMA----PECPHKIVGIRPGEKLH  258 (324)
T ss_pred             HHHHHHHHHHH---CCCCEEEEC-CCCCCHHHHHHHHHH----CCCCEEECCCCCCHHHH
T ss_conf             99999999982---889849983-697025999999860----46986145788860234