HHsearch alignment for GI: 254780328 and conserved domain: cd00650
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.52 E-value=0.012 Score=35.62 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=62.9
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC----EEEEEECCCCC---CHHHHCCC-CE---EEEECCCHHHHHHHHHHCCCCEEEE
Q ss_conf 99968788277999999998798----89999268767---52130238-67---9842689999999987569889995
Q gi|254780328|r 6 VLVVGGAGYIGAHTCRVLYERGF----LPIVLDNLSSG---HAEFVLWG-PL---EQVDICDYTNLRAVFAKYQPASVMH 74 (333)
Q Consensus 6 IlItG~tGfiGs~l~~~L~~~g~----~v~~~d~~~~~---~~~~~~~~-~~---~~~Di~d~~~l~~~~~~~~~d~ViH 74 (333)
T Consensus 1 V~IIGA~G~VG~~~a~~l~~~~~~~~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~~~~~~~~--daDvVVi 76 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSIT--DDPYEAFK--DADVVII 76 (263)
T ss_pred CEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEC--CCHHHHHC--CCCEEEE
T ss_conf 9898779779999999998289999988999958987208799999854523578739974--87389837--9989999
Q ss_pred CHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 71440112234310012330123332221122222222222
Q gi|254780328|r 75 FAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVRRFI 115 (333)
Q Consensus 75 lAa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i 115 (333)
T Consensus 77 tag~~~k--~g~~R~dll~~N~~I~~~i~~~i~~~~p~a~i 115 (263)
T cd00650 77 TAGVGRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWI 115 (263)
T ss_pred ECCCCCC--CCCCHHHHHHCHHHHHHHHHHHHHHCCCCCEE
T ss_conf 0577889--99876566403288999998888732998369