HHsearch alignment for GI: 254780328 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.26 E-value=0.0023 Score=40.09 Aligned_cols=105 Identities=17% Similarity=0.117 Sum_probs=63.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCC-----CCHHHHCCC-CE--EEEEC---CCHHHHHHHHHHCCCC
Q ss_conf 4799968788277999999998798--8999926876-----752130238-67--98426---8999999998756988
Q gi|254780328|r 4 KNVLVVGGAGYIGAHTCRVLYERGF--LPIVLDNLSS-----GHAEFVLWG-PL--EQVDI---CDYTNLRAVFAKYQPA 70 (333)
Q Consensus 4 kkIlItG~tGfiGs~l~~~L~~~g~--~v~~~d~~~~-----~~~~~~~~~-~~--~~~Di---~d~~~l~~~~~~~~~d 70 (333)
T Consensus 1 mKV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~----~~--daD 74 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSD----VA--GSD 74 (309)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHHH----HC--CCC
T ss_conf 989999999769999999998379987599960556434231123554503433688767982798899----68--999
Q ss_pred EEEECHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9995714401122343100123301233322211222222222222
Q gi|254780328|r 71 SVMHFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVRRFIF 116 (333)
Q Consensus 71 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~~ll~~~~~~~~~~~i~ 116 (333)
T Consensus 75 ivVitAG~~rk~--g~tR~dLl~~Na~I~~~i~~~i~~~~p~~ivi 118 (309)
T cd05294 75 IVIITAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKIL 118 (309)
T ss_pred EEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 999878988995--99878999989999999998764269984999