HHsearch alignment for GI: 254780328 and conserved domain: pfam00899

>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=96.06  E-value=0.021  Score=34.14  Aligned_cols=118  Identities=19%  Similarity=0.199  Sum_probs=54.2

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHHCC-CCEEEEECC--CHHHHHHHHHHCCCCEEEECH--H
Q ss_conf             4799968788277999999998798-899992687675213023-867984268--999999998756988999571--4
Q gi|254780328|r    4 KNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSGHAEFVLW-GPLEQVDIC--DYTNLRAVFAKYQPASVMHFA--G   77 (333)
Q Consensus         4 kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~~~~~~~~-~~~~~~Di~--d~~~l~~~~~~~~~d~ViHlA--a   77 (333)
T Consensus         2 skVlivG~Gg-lG~~~~~~La~~Gvg~i~lvD~D~ve-~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~   79 (134)
T pfam00899         2 SRVLVVGAGG-LGSPAAEYLARAGVGKLTLVDFDTVE-LSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPER   79 (134)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCCCC-CCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             8899989888-99999999999389749999895676-322272242336466881079999999977899589999256


Q ss_pred             HCC--CCCCCCCCEEEE--EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             401--122343100123--30123332221122222222222233332222
Q gi|254780328|r   78 LTN--ISESVKNPSLFY--EINIKGSFNLIATAIESNVRRFIFSSTCATYG  124 (333)
Q Consensus        78 ~~~--~~~~~~~p~~~~--~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG  124 (333)
T Consensus        80 i~~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~~~~i-p~i~~~~~g~~G  129 (134)
T pfam00899        80 LTPENLEELLKGADLVVDALDNFAARYLLNDACVKRGI-PLISAGALGFDG  129 (134)
T ss_pred             CCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCC-CEEEEECCCCEE
T ss_conf             79778764264488999998999999999999998599-899955467889