HHsearch alignment for GI: 254780328 and conserved domain: pfam00899
>pfam00899 ThiF ThiF family. This family contains a repeated domain in ubiquitin activating enzyme E1 and members of the bacterial ThiF/MoeB/HesA family.
Probab=96.06 E-value=0.021 Score=34.14 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=54.2
Q ss_pred CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCCCHHHHCC-CCEEEEECC--CHHHHHHHHHHCCCCEEEECH--H
Q ss_conf 4799968788277999999998798-899992687675213023-867984268--999999998756988999571--4
Q gi|254780328|r 4 KNVLVVGGAGYIGAHTCRVLYERGF-LPIVLDNLSSGHAEFVLW-GPLEQVDIC--DYTNLRAVFAKYQPASVMHFA--G 77 (333)
Q Consensus 4 kkIlItG~tGfiGs~l~~~L~~~g~-~v~~~d~~~~~~~~~~~~-~~~~~~Di~--d~~~l~~~~~~~~~d~ViHlA--a 77 (333)
T Consensus 2 skVlivG~Gg-lG~~~~~~La~~Gvg~i~lvD~D~ve-~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~ 79 (134)
T pfam00899 2 SRVLVVGAGG-LGSPAAEYLARAGVGKLTLVDFDTVE-LSNLNRQILFTESDIGKPKAEVAKERLRAINPDVEVEAYPER 79 (134)
T ss_pred CEEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCCCC-CCCCCCEEECCHHHCCCEEHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 8899989888-99999999999389749999895676-322272242336466881079999999977899589999256
Q ss_pred HCC--CCCCCCCCEEEE--EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 401--122343100123--30123332221122222222222233332222
Q gi|254780328|r 78 LTN--ISESVKNPSLFY--EINIKGSFNLIATAIESNVRRFIFSSTCATYG 124 (333)
Q Consensus 78 ~~~--~~~~~~~p~~~~--~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vYG 124 (333)
T Consensus 80 i~~~~~~~~~~~~DvVi~~~Dn~~~r~~ln~~c~~~~i-p~i~~~~~g~~G 129 (134)
T pfam00899 80 LTPENLEELLKGADLVVDALDNFAARYLLNDACVKRGI-PLISAGALGFDG 129 (134)
T ss_pred CCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCC-CEEEEECCCCEE
T ss_conf 79778764264488999998999999999999998599-899955467889