RPSBLAST alignment for GI: 254780328 and conserved domain: pfam04321
>gnl|CDD|113104 pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284
Score = 46.8 bits (112), Expect = 7e-06
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 27/168 (16%)
Query: 6 VLVVGGAGYIGAHTCRVLYERGFLPIVLDNLSSGHAEFVLWGPLEQVDICDYTNLRAVFA 65
+LV G G +G R+L ERG + LD ++D+ D + A+
Sbjct: 1 ILVTGANGQLGRELTRLLAERGVEVVALDR--------------PELDLTDPEAVAALVR 46
Query: 66 KYQPASVMHFAGLTNISESVKNPSLFYEINIKGSFNLIATAIESNVRRFIFSST----CA 121
+ +P V++ A T + ++ P L Y +N G NL I ST
Sbjct: 47 EARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA-PLIHISTDYVFDG 105
Query: 122 TYGIPHNTIITENDPQESITPYGYTKYVVERELLQHNKVNGLRSVVLR 169
G P+ E+DP + YG TK E+ +L N R ++LR
Sbjct: 106 AKGGPY----REDDPTGPLNVYGRTKLAGEQAVLAANP----RHLILR 145