RPSBLAST alignment for GI: 254780328 and conserved domain: TIGR01472

>gnl|CDD|162378 TIGR01472, gmd, GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). Length = 343

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 62/293 (21%), Positives = 106/293 (36%), Gaps = 34/293 (11%)

Query: 53  DICDYTNLRAVFAKYQPASVMHFAGLTNISESVKNPSLFYEINIKGSFNLI-ATAIESNV 111
           D+ D +NLR +  + +P  + + A  +++  S + P    +++  G+  L+ A      +
Sbjct: 63  DLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLI 122

Query: 112 R--RFIFSSTCATYGIPHNTIITENDPQESITPYGYTK-----YVVE-RELLQHNKVNGL 163
           +  +F  +ST   YG        E  P    +PY   K       V  RE      VNG+
Sbjct: 123 KSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGI 182

Query: 164 RSVVLRYFNAAGATLDSIIGEWHNPETHVIPLAI-KTAMGYQNSFKVFGQDYATRDGTCL 222
                  FN          GE  N  T  I  A  K  +G Q      G   A RD    
Sbjct: 183 ------LFNHE----SPRRGE--NFVTRKITRAAAKIKLGLQEKL-YLGNLDAKRDWGHA 229

Query: 223 RDYIHVLDLANAHIMALEYLINQGDSIAIN-------LGTGTGI----TVKEIISTIQSM 271
           +DY+  + L        +Y+I  G++ ++           G  +         +   +  
Sbjct: 230 KDYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKET 289

Query: 272 YECAFPITYESRRIGDPPSLVADNKKAKKILGWNPKYKLRDIIESAWNWHLKY 324
            +    I     R  +   L+ D  KAK+ LGW P+     +++      L+ 
Sbjct: 290 GKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLEL 342