HHsearch results for GI: 254780329 and protein with PDBid: 1vmb_A
>1vmb_A 30S ribosomal protein S6; TM0603, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.70A {Thermotoga maritima} SCOP: d.58.14.1
Probab=99.97 E-value=2.2e-31 Score=203.30 Aligned_cols=102 Identities=20% Similarity=0.419 Sum_probs=95.9
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC-CCEEEEEECCCCCCCCEECCCCCEEEEEEEEEECCHHHHHHHHHHH
Q ss_conf 987059999878999999999999999999856-9789997036865353032224189999999808977999999980
Q gi|254780329|r 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASPPAAIHEMKRKM 79 (135)
Q Consensus 1 M~~YE~~~i~~p~~~~~~~~~~~~~~~~~i~~~-gg~i~~~e~wG~r~LAY~I~k~~~G~Y~~~~f~~~~~~i~el~~~l 79 (135)
||+||+|||++|+++++++..+++++.++|+++ ||+|.++++||+|+|||||+|+++|+|++++|+++|+.+++|++.|
T Consensus 18 ~R~YE~~~Il~p~l~e~~~~~~~~~i~~~I~~~~gG~I~~~e~wG~r~LAY~I~k~~~G~Y~~~~f~~~~~~i~el~~~l 97 (140)
T 1vmb_A 18 ERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGDYTVIYFRCDGQNLQELENFY 97 (140)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECSSSTHHHHHHH
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
T ss_conf 33011999988999989999999999999975599889986612440124415779889999999347803799999986
Q ss_pred CCCCHHEEEEEEEECCCCCCCCH
Q ss_conf 89802100112441134556435
Q gi|254780329|r 80 RIDENVLRSLTLLVDSHEQSPTL 102 (135)
Q Consensus 80 k~~~~VLR~l~vk~~~~~~~~~~ 102 (135)
++|++||||||||+++....+..
T Consensus 98 kl~~~VLR~l~vk~~~~~~~~~~ 120 (140)
T 1vmb_A 98 RVTPEIIRWQTFRRFDLEKKERK 120 (140)
T ss_dssp HTCTTEEEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEEEEECCCCCCCCH
T ss_conf 36758258999970355545031