HHsearch results for GI: 254780329 and protein with PDBid: 2j5a_A
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=99.96 E-value=3e-30 Score=196.60 Aligned_cols=101 Identities=29% Similarity=0.578 Sum_probs=96.3
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEECCCCCEEEEEEEEEECC-HHHHHHHHHHH
Q ss_conf 98705999987899999999999999999985697899970368653530322241899999998089-77999999980
Q gi|254780329|r 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQENGGEVRLVNELGMRTIAYRIRKNRKAYYVFMNIASP-PAAIHEMKRKM 79 (135)
Q Consensus 1 M~~YE~~~i~~p~~~~~~~~~~~~~~~~~i~~~gg~i~~~e~wG~r~LAY~I~k~~~G~Y~~~~f~~~-~~~i~el~~~l 79 (135)
||+||++||++|+++++++.++++++.++|+++||+|.++++||+|+|||||+|+++|+|++++|+++ |+.+++|++.|
T Consensus 7 M~~YE~~~il~p~l~~~~~~~~~~~i~~~i~~~gg~i~~~~~wG~r~LAY~I~k~~~G~Y~~~~f~~~~~~~i~el~~~l 86 (110)
T 2j5a_A 7 LRYYETVFAVKPTLSEEEMKKKFEQVKEFIKQKGGEILYEEDWGMRQLAYPIQKFNNARYFLVQFKTENPQLPNELDFQL 86 (110)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEEECSSCSSSCSEEEEEEEEEEESCTTHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHH
T ss_conf 57101999988999989999999999999997898899985121103452346466689999999968788999999986
Q ss_pred CCCCHHEEEEEEEECCCCCCCC
Q ss_conf 8980210011244113455643
Q gi|254780329|r 80 RIDENVLRSLTLLVDSHEQSPT 101 (135)
Q Consensus 80 k~~~~VLR~l~vk~~~~~~~~~ 101 (135)
++|++|||||+||+++....++
T Consensus 87 ~l~~~VlR~l~vk~~~~~~~~~ 108 (110)
T 2j5a_A 87 KIDEDVIRWLNIQIKESEVKKN 108 (110)
T ss_dssp HHCTTEEEEEEEEECGGGCCCC
T ss_pred CCCCCEEEEEEEEECCCCCCCC
T ss_conf 6787826789999845455778