RPSBLAST alignment of GI: 254780329 and protein with PDBid: 1vmb

>1vmb_A 30S ribosomal protein S6; TM0603, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.70A {Thermotoga maritima} SCOP: d.58.14.1 Length = 140
 Score = 94.6 bits (235), Expect = 7e-21
 Identities = 20/116 (17%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 1   MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAY 59
            ++YE +F++  ++  ++ ++ + + + +I+E   G++  V  +GMR  AY I+K  +  
Sbjct: 18  ERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGD 77

Query: 60  YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
           Y  +        + E++   R+   ++R  T      E+      +     +  + 
Sbjct: 78  YTVIYFRCDGQNLQELENFYRVTPEIIRWQTFRRFDLEKKERKAQREKAAAEATES 133