RPSBLAST alignment of GI: 254780329 and protein with PDBid: 1vmb
>1vmb_A 30S ribosomal protein S6; TM0603, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.70A {Thermotoga maritima} SCOP: d.58.14.1 Length = 140
Score = 94.6 bits (235), Expect = 7e-21
Identities = 20/116 (17%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 1 MKLYEHVFLLRQDISSQQIKDTIGQYQSLIQEN-GGEVRLVNELGMRTIAYRIRKNRKAY 59
++YE +F++ ++ ++ ++ + + + +I+E G++ V +GMR AY I+K +
Sbjct: 18 ERIYESMFIIAPNVPEEERENLVERVKKIIEERVKGKIDKVERMGMRKFAYEIKKFNEGD 77
Query: 60 YVFMNIASPPAAIHEMKRKMRIDENVLRSLTLLVDSHEQSPTLTIQRHDRDDRNDR 115
Y + + E++ R+ ++R T E+ + + +
Sbjct: 78 YTVIYFRCDGQNLQELENFYRVTPEIIRWQTFRRFDLEKKERKAQREKAAAEATES 133