HHsearch alignment for GI: 254780330 and conserved domain: COG0238

>COG0238 RpsR Ribosomal protein S18 [Translation, ribosomal structure and biogenesis].
Probab=99.93  E-value=9e-27  Score=171.10  Aligned_cols=68  Identities=56%  Similarity=0.932  Sum_probs=64.4

Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             27777788885435038851144688999996289984855033174899999999999999970465
Q gi|254780330|r   11 RRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI   78 (83)
Q Consensus        11 ~~~~~~~~k~c~~~~~~~~~iDYKn~~lL~~Fis~~GkI~prr~TG~~~k~Qr~i~~aIKrAR~~gLl   78 (83)
T Consensus         8 r~~~~rrrk~c~f~~~~~~~iDYKd~~~Lkrfise~GKI~prRiTG~sak~QR~la~AIKRAR~laLl   75 (75)
T COG0238           8 RAPFFRRRKVCRFTAEGIEEIDYKDVELLKRFISERGKILPRRITGTSAKHQRRLARAIKRARYLALL   75 (75)
T ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             04334446436565024884672489999998562676565412352399999999999999998609