HHsearch alignment for GI: 254780330 and conserved domain: pfam01084

>pfam01084 Ribosomal_S18 Ribosomal protein S18.
Probab=99.83  E-value=3.7e-21  Score=139.71  Aligned_cols=53  Identities=58%  Similarity=0.913  Sum_probs=50.6

Q ss_pred             CCCCCCCCCCHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             38851144688999996289984855033174899999999999999970465
Q gi|254780330|r   26 KGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLI   78 (83)
Q Consensus        26 ~~~~~iDYKn~~lL~~Fis~~GkI~prr~TG~~~k~Qr~i~~aIKrAR~~gLl   78 (83)
T Consensus         2 ~~~~~idYKn~~lL~~fis~~GkI~prr~Tg~~~k~Qr~l~~aIKrAR~lgLl   54 (54)
T pfam01084         2 DKIEYIDYKDVELLRRFISERGKILPRRITGLCAKQQRKLAKAIKRARILALL   54 (54)
T ss_pred             CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             98887288896999987699982839731888999999999999999996378