HHSEARCH alignment of GI: 254780330 and SCOP domain: d2qalr1

Alignment

Probab=99.89  E-value=3.2e-24  Score=154.31  Aligned_cols=53  Identities=57%  Similarity=0.940  Sum_probs=51.6

Q ss_pred             CCCCCCHHHHHHHCCCCCEECCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             11446889999962899848550331748999999999999999704658676
Q gi|254780330|r   30 RIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQRELAKAIKRARYLGLIAYVN   82 (83)
Q Consensus        30 ~iDYKn~~lL~~Fis~~GkI~prr~TG~~~k~Qr~i~~aIKrAR~~gLlPy~~   82 (83)
                      .|||||+++|++|||++|+|+||++||+|+++||+|++|||+||+|||||||+
T Consensus         1 ~iDYKn~~lL~~Fis~~GkI~~rr~Tgl~~k~Qr~l~~aIkrAR~~gLlP~~~   53 (55)
T d2qalr1           1 EIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTD   53 (55)
T ss_dssp             CCCSSCHHHHGGGBCTTSSBCCSTTTCCCHHHHHHHHHHHHHHHHTTSSCSSS
T ss_pred             CCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             97833689999876998858387407878999999999999999840677245

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Ribosomal protein S18
family: Ribosomal protein S18
domain: Ribosomal protein S18
species: Escherichia coli [TaxId: 562]