PSIBLAST alignment of GI: 254780330 and protein with PDB id: 2j00
gi|116668214|pdb|2J00|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. Length = 88
>gi|116668275|pdb|2J02|R Chain R, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. Length = 88
Score = 75.8 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 3 EVAPTPLLRRNVSHRRKSCPLSGKGAPRIDYKDIRLLNRFLSQRGKIVPSRISSVSHKKQ 62
P +R S + K + DY+++ +L RFLS+ GKI+P R + +S K+Q
Sbjct: 5 NAKPKKEAQRRPSRKAKV-KATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQ 63
Query: 63 RELAKAIKRARYLGLIAYV 81
R LAK IKRAR LGL+ +
Sbjct: 64 RILAKTIKRARILGLLPFT 82