HHsearch alignment of GI: 254780331 and MMDB domain: 1div_A_1-39
>1div_A (A:1-39) Ribosomal protein L9; rRNA-binding; 2.60A {Bacillus stearothermophilus}
Probab=99.62 E-value=8.5e-17 Score=126.11 Aligned_cols=39 Identities=41% Similarity=0.721 Sum_probs=38.4
Q ss_pred EEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCEECC
Q ss_conf 334652011175877838882776321101437873012
Q gi|254780331|r 14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRA 52 (179)
Q Consensus 14 mkVIL~~dv~~lG~~Gdiv~Vk~GyaRN~LiP~~~A~~a 52 (179)
|||||++||++||++||+|+|++|||||||||+++|++|
T Consensus 1 mkVIL~~dv~~lGk~Gdvv~V~~GyaRN~LiP~~lA~~A 39 (39)
T 1div_A 1 MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEA 39 (39)
T ss_dssp CEEEECSBSSSBGGGTEEEECCTTHHHHTTTTTTSEEEC
T ss_pred CEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf 979990441036988999998736688874066565351