HHsearch alignment of GI: 254780331 and MMDB domain: 1div_A_40-149
>1div_A (A:40-149) Ribosomal protein L9; rRNA-binding; 2.60A {Bacillus stearothermophilus}
Probab=99.93 E-value=3.6e-25 Score=178.86 Aligned_cols=109 Identities=26% Similarity=0.472 Sum_probs=105.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH-CCCCCCHHHHCCCC
Q ss_conf 20146888778999998422346789999887654321000255654310034107899999986-08876866630265
Q gi|254780331|r 53 NKENKILFESQRSVLEAANLEKKAKYEGISKDLAKKNFSLIRAAGDTGYLYGSVSSRDIADLLIE-EGFDVNRGQINLKS 131 (179)
Q Consensus 53 T~~n~~~~~~~~~~~~~~~~~~~~~a~~~~~~L~~~~l~i~~k~~e~gkLfGsVt~~dI~~~L~~-~gi~I~k~~I~l~~ 131 (179)
|++|+++++.+++.++++..+.+++|+.+++.|++..|+|.+++|++|+||||||+.||+++|.+ .|++||+++|.+++
T Consensus 1 T~~n~~~~~~~~~~~~~~~~~~~~~a~~la~~L~~~~l~i~~k~g~~gklfGSVt~~~Ia~~l~~~~g~~idk~~I~l~~ 80 (110)
T 1div_A 1 TPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKLTVTIPAKAGEGGRLFGSITSKQIAESLQAQHGLKLDKRKIELAD 80 (110)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECBCGGGEEEEEECHHHHHHHHHHHHCCCCCGGGBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHCCC
T ss_conf 58899999998899988754234577889887433348999950689870576169999999986318766844540334
Q ss_pred CCCCEEEEEEEEEECCCEEEEEEEEEEECH
Q ss_conf 643205499999963972999999997251
Q gi|254780331|r 132 PIKSVGIHNIMISLHADVSTTITLNVARST 161 (179)
Q Consensus 132 pIk~~G~y~V~I~L~~~V~a~i~V~V~~~~ 161 (179)
|||++|+|.|+|+||++|+|+|+|+|++++
T Consensus 81 ~Ik~~G~~~v~i~Lh~~V~a~i~v~V~~ee 110 (110)
T 1div_A 81 AIRALGYTNVPVKLHPEVTATLKVHVTEQK 110 (110)
T ss_dssp CEEESEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CCCCCEEEEEEEEECCCEEEEEEEEEEECC
T ss_conf 622257789999953986999999999578