HHsearch alignment of GI: 254780331 and MMDB domain: 2j01_I_1-40

>2j01_I (I:1-40) 50S ribosomal protein L9; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=99.63  E-value=4.6e-17  Score=127.80  Aligned_cols=40  Identities=60%  Similarity=0.942  Sum_probs=39.5

Q ss_pred             EEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCCEECCC
Q ss_conf             3346520111758778388827763211014378730122
Q gi|254780331|r   14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRAN   53 (179)
Q Consensus        14 mkVIL~~dv~~lG~~Gdiv~Vk~GyaRN~LiP~~~A~~aT   53 (179)
                      |+|||++||++||++||+|+|++|||||||||+|+|++||
T Consensus         1 m~VIL~~dv~~lG~~Gdiv~V~~GyaRN~Lip~~~A~~aT   40 (40)
T 2j01_I            1 MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLAT   40 (40)
T ss_dssp             CEEEECSCCSSSCSTTCEEECCHHHHHHTTTTTTSEEECC
T ss_pred             CEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
T ss_conf             9699905410279789899987157888731212320241