HHSEARCH alignment of GI: 254780331 and SCOP domain: d2gycf1

Alignment
>d2gycf1 d.99.1.1 (F:59-149) Ribosomal protein L9 C-domain {Escherichia coli [TaxId: 562]}
Probab=99.86  E-value=2.3e-22  Score=158.73  Aligned_cols=89  Identities=26%  Similarity=0.500  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCC-CCCCEEEEEEEEEECCCE
Q ss_conf             23467899998876543-2100025565431003410789999998608876866630265-643205499999963972
Q gi|254780331|r   72 LEKKAKYEGISKDLAKK-NFSLIRAAGDTGYLYGSVSSRDIADLLIEEGFDVNRGQINLKS-PIKSVGIHNIMISLHADV  149 (179)
Q Consensus        72 ~~~~~~a~~~~~~L~~~-~l~i~~k~~e~gkLfGsVt~~dI~~~L~~~gi~I~k~~I~l~~-pIk~~G~y~V~I~L~~~V  149 (179)
                      ++.++.|+.++++|+++ .++|.+++|++|+||||||++||+++|.++|++|++++|.||+ |||++|.|+|+|+||++|
T Consensus         1 Ae~l~~A~~~a~kl~~~~~i~i~~kage~GkLfGSVt~~dI~~~l~~~g~~Idk~~I~l~~~~IK~lG~y~v~i~Lh~~V   80 (91)
T d2gycf1           1 AEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEV   80 (91)
T ss_dssp             CHHHHHHHHHHHHHTTTCCCEEEECEEETTEESSCCCHHHHHHHHTTTTCCCCSTTSCCSSCCCCBSSEEEEEECSSSSC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCHHHEECCCCCCCCCEEEEEEEEECCCE
T ss_conf             94799999999985399579999995899814600278999999998699636887897886400338999999975997


Q ss_pred             EEEEEEEEEEC
Q ss_conf             99999999725
Q gi|254780331|r  150 STTITLNVARS  160 (179)
Q Consensus       150 ~a~i~V~V~~~  160 (179)
                      +++++|+|+++
T Consensus        81 ~~~i~v~Vv~e   91 (91)
T d2gycf1          81 FAKVIVNVVAE   91 (91)
T ss_dssp             CEEEEEEEEEC
T ss_pred             EEEEEEEEEEC
T ss_conf             99999999979


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L9 C-domain
superfamily: Ribosomal protein L9 C-domain
family: Ribosomal protein L9 C-domain
domain: Ribosomal protein L9 C-domain
species: Escherichia coli [TaxId: 562]