RPSBLAST alignment of GI: 254780331 and protein with PDBid: 1nkw
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I Length = 146
Score = 128 bits (322), Expect = 1e-30
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Query: 14 MEVILLQNVTNLGPMGEVVKVKNGYARNYLLPKKKALRANKENKILFESQRSVLEAANLE 73
M+VILL+ LG GEVV VK+GYARN+L+P+ A+ A + N E+Q +E +
Sbjct: 1 MQVILLEPS-RLGKTGEVVSVKDGYARNWLIPQGLAVSATRTNMKTLEAQLRSIEKRQAQ 59
Query: 74 KKAKYEGISKDLAKKNFSLIRAAGDTGYLYGSVSSRDIADLLIEEGFDVNRGQINLKSPI 133
+KA E ++ L L AG+ G +YG+V+ +D+A+ L + GFDV+R +I++ +
Sbjct: 60 EKAVAEDLASRLNGVAVELSVRAGE-GKIYGAVTHQDVANSLDQLGFDVDRRKIDMPKTV 118
Query: 134 KSVGIHNIMISLHADVSTTITLNV 157
K VG ++I H +V+ + L V
Sbjct: 119 KEVGEYDIAYRAHPEVTIPMKLVV 142