HHsearch alignment for GI: 254780332 and conserved domain: COG1123
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].
Probab=96.43 E-value=0.03 Score=36.59 Aligned_cols=178 Identities=24% Similarity=0.311 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE--CCCCHHHHHH--HH
Q ss_conf 0137765564167726776213100276999999999985101112333332124797589995--8521799987--89
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYS--LEMSSEQLAT--RI 281 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fS--lEMs~~el~~--R~ 281 (504)
T Consensus 304 ~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~---------------~P~~G~i~~~g~~~~~~~~~~~~~r~~ 368 (539)
T COG1123 304 VKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLL---------------PPSSGSIIFDGQDLDLTGGELRRLRRR 368 (539)
T ss_pred EEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCC---------------CCCCCEEEEECCCCCCCCCHHHHHHHH
T ss_conf 01230124576388789998899999899999994877---------------888844999276556552314552420
Q ss_pred HHHHHHHCCCC--------------CC-CCCCCHHHHH-HHHHHHHHHHHCC-EEEECCC-CCCHHHH--HHHHHHHCCC
Q ss_conf 99987410110--------------00-1213768899-8999999986278-0782589-9889999--9988640224
Q gi|254780332|r 282 ISEQTEVPSSK--------------IR-RGELTRPDYE-KIVACSQVMQKLP-LYIDQTG-GISMSQL--ATRARRLKRQ 341 (504)
Q Consensus 282 is~~s~I~~~~--------------i~-~g~l~~~e~~-~i~~a~~~l~~~~-l~I~d~~-~~ti~~I--~~~~r~~~~~ 341 (504)
T Consensus 369 ~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~Vg-L~~~~l~ryP~elSGGQrQRvaIARALa-- 445 (539)
T COG1123 369 IQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVG-LPPEFLDRYPHELSGGQRQRVAIARALA-- 445 (539)
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC-CCHHHHHCCCCCCCCCHHHHHHHHHHHH--
T ss_conf 3799967623367000699998747865066516789999999998719-9978971386003852567899999985--
Q ss_pred CCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 44746776713532566443211378899999999999988279199977138220168999984010143242233138
Q gi|254780332|r 342 RGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDAD 421 (504)
Q Consensus 342 ~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD 421 (504)
T Consensus 446 ~~P~lli~D-----Ep~Sa-LDvsv--qa~VlnLl~~lq~e~g~t~lfISH----------------D---l~vV~~i~d 498 (539)
T COG1123 446 LEPKLLILD-----EPVSA-LDVSV--QAQVLNLLKDLQEELGLTYLFISH----------------D---LAVVRYIAD 498 (539)
T ss_pred CCCCEEEEC-----CCCCC-CCHHH--HHHHHHHHHHHHHHHCCEEEEEEC----------------C---HHHHHHHCC
T ss_conf 499899964-----87432-27899--999999999999974988999958----------------7---899986386
Q ss_pred EEEEEEC
Q ss_conf 7889725
Q gi|254780332|r 422 VVLFVIR 428 (504)
Q Consensus 422 ~v~~l~R 428 (504)
T Consensus 499 rv~vm~~ 505 (539)
T COG1123 499 RVAVMYD 505 (539)
T ss_pred EEEEEEC
T ss_conf 6899978