HHsearch alignment for GI: 254780332 and conserved domain: COG1129
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].
Probab=94.76 E-value=0.4 Score=28.00 Aligned_cols=168 Identities=20% Similarity=0.230 Sum_probs=78.1
Q ss_pred HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH---------------
Q ss_conf 16772677621310027699999999998510111233333212479758999585217999878---------------
Q gi|254780332|r 216 LQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATR--------------- 280 (504)
Q Consensus 216 l~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R--------------- 280 (504)
T Consensus 282 vr~GEIlGiaGLvGaGRTEl~~~lfG--~~~------~~~G~i~l~G~~v~~~s---p~~Ai~~Gi~~v~EDRk~~Gl~l 350 (500)
T COG1129 282 VRAGEILGIAGLVGAGRTELARALFG--ARP------ASSGEILLDGKPVRIRS---PRDAIKAGIAYVPEDRKSEGLVL 350 (500)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHC--CCC------CCCCEEEECCEECCCCC---HHHHHHCCCEECCCCCCCCCCCC
T ss_conf 70784878840666788999999828--986------77746999999825899---99999719886776544276737
Q ss_pred HHHHHHHHCCC---CCCCC-CCCH-HHHHHHHHHHHHHHHCCEEEEC--CC--CCCH-HHHH-HHHHHHCCCCCCCEEEE
Q ss_conf 99998741011---00012-1376-8899899999998627807825--89--9889-9999-98864022444746776
Q gi|254780332|r 281 IISEQTEVPSS---KIRRG-ELTR-PDYEKIVACSQVMQKLPLYIDQ--TG--GISM-SQLA-TRARRLKRQRGLDLLIV 349 (504)
Q Consensus 281 ~is~~s~I~~~---~i~~g-~l~~-~e~~~i~~a~~~l~~~~l~I~d--~~--~~ti-~~I~-~~~r~~~~~~gi~~vvI 349 (504)
T Consensus 351 ~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l---~Ik~~s~~~~v~~LSGGNQQKVvlarwL~--~~p~vLil 425 (500)
T COG1129 351 DMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRL---RIKTPSPEQPIGTLSGGNQQKVVLARWLA--TDPKVLIL 425 (500)
T ss_pred CCCHHHHEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHC---CCCCCCCCCHHHCCCCHHHHHHHHHHHHH--HCCCEEEE
T ss_conf 88399963068656432364347189999999999961---83668833611107736566999999997--58999998
Q ss_pred CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf 713532566443211378899999999999988279199977138220168999984010143242233138788972
Q gi|254780332|r 350 DYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504)
Q Consensus 350 DYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504)
T Consensus 426 D-----EPTRGIDV---GAK~eIy~li~~lA~~-G~ail~iSS----------------El---pEll~~~DRIlVm~ 475 (500)
T COG1129 426 D-----EPTRGIDV---GAKAEIYRLIRELAAE-GKAILMISS----------------EL---PELLGLSDRILVMR 475 (500)
T ss_pred C-----CCCCCCCC---CHHHHHHHHHHHHHHC-CCEEEEEEC----------------CH---HHHHHHCCEEEEEE
T ss_conf 8-----99877541---4589999999999977-998999949----------------75---99884097799998