HHsearch alignment for GI: 254780332 and conserved domain: COG1157

>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=93.77  E-value=0.23  Score=29.87  Aligned_cols=42  Identities=31%  Similarity=0.514  Sum_probs=31.0

Q ss_pred             CCCCCCCHHHHHHHHHHCCCC-EEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             644321013776556416772-67762131002769999999999
Q gi|254780332|r  200 AGVSTGIQTLDKQMGGLQRSD-LIIIAGRPGMGKTSLATNIAYNV  243 (504)
Q Consensus       200 ~Gi~TG~~~LD~~~gGl~~G~-l~Viaarpg~GKTalalniA~~~  243 (504)
T Consensus       145 ~~l~tGVRaIDgllT-~G~GQRiGIFAg-sGVGKStLLgMiar~t  187 (441)
T COG1157         145 EPLDTGVRAIDGLLT-CGKGQRIGIFAG-SGVGKSTLLGMIARNT  187 (441)
T ss_pred             CCCCCCCEEEECCCC-CCCCCEEEEEEC-CCCCHHHHHHHHHCCC
T ss_conf             645456144401002-246746788716-9986899999996246