HHsearch alignment for GI: 254780332 and conserved domain: COG1205
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only].
Probab=96.53 E-value=0.061 Score=34.25 Aligned_cols=148 Identities=16% Similarity=0.194 Sum_probs=77.2
Q ss_pred HHHCCCCEEEEECCCHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCC--
Q ss_conf 64167726776213100276-999999999985101112333332124797589995852179998789999874101--
Q gi|254780332|r 214 GGLQRSDLIIIAGRPGMGKT-SLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPS-- 290 (504)
Q Consensus 214 gGl~~G~l~Viaarpg~GKT-alalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~-- 290 (504)
T Consensus 80 ~~~~~G~~vvVtTgTgSGKTe~FllPIld~~l~~~-------------~a~AL~lYPtnALa~DQ~~rl~~~~~~~~~~v 146 (851)
T COG1205 80 RLIREGRNVVVTTGTGSGKTESFLLPILDHLLRDP-------------SARALLLYPTNALANDQAERLRELISDLPGKV 146 (851)
T ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC-------------CCEEEEEECHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99977998899789988545898999999983086-------------65089980437767669999999998478751
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHHHHHCC-EEEECCCCCCHHHHHHHHHHHC-----CCCCCCEEEECCHHHCCCCCCCCC
Q ss_conf -100012137688998999999986278-0782589988999999886402-----244474677671353256644321
Q gi|254780332|r 291 -SKIRRGELTRPDYEKIVACSQVMQKLP-LYIDQTGGISMSQLATRARRLK-----RQRGLDLLIVDYIQLMTTSKKIEE 363 (504)
Q Consensus 291 -~~i~~g~l~~~e~~~i~~a~~~l~~~~-l~I~d~~~~ti~~I~~~~r~~~-----~~~gi~~vvIDYLqli~~~~~~~~ 363 (504)
T Consensus 147 ~~~~y~Gdt~~~~r~------~~~~~pp~Ill-T----NpdMLh~~llr~~~~~~~~~~~Lk~lVvDElHtYrGv~--G- 212 (851)
T COG1205 147 TFGRYTGDTPPEERR------AIIRNPPDILL-T----NPDMLHYLLLRNHDAWLWLLRNLKYLVVDELHTYRGVQ--G- 212 (851)
T ss_pred EEEEECCCCCHHHHH------HHHHCCCCEEE-E----CHHHHHHHHHCCCCCHHHHHHCCCEEEEECCEECCCCH--H-
T ss_conf 354434889678889------98738997898-3----88999898636882278887327589984441215603--7-
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC--CEEEEE
Q ss_conf 1378899999999999988279--199977
Q gi|254780332|r 364 NRVLEITGITMALKALAKELNI--PIIALS 391 (504)
Q Consensus 364 ~r~~~i~~is~~lK~lA~e~~i--pvi~ls 391 (504)
T Consensus 213 ---S~vA~llRRL~~~~~~~~~~~q~i~~S 239 (851)
T COG1205 213 ---SEVALLLRRLLRRLRRYGSPLQIICTS 239 (851)
T ss_pred ---HHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf ---889999999999972458996289983