HHsearch alignment for GI: 254780332 and conserved domain: COG1435

>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism].
Probab=95.93  E-value=0.08  Score=33.34  Aligned_cols=120  Identities=21%  Similarity=0.223  Sum_probs=76.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             67726776213100276999999999985101112333332124797589995852179998789999874101100012
Q gi|254780332|r  217 QRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRG  296 (504)
Q Consensus       217 ~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g  296 (504)
T Consensus         2 ~~g~l~~i~gpM~SGKT~eLl~r~~~~~~---------------~g~~v~vfkp~iD~R~~~~-~V~Sr~G~~~~A----   61 (201)
T COG1435           2 KMGWLEFIYGPMFSGKTEELLRRARRYKE---------------AGMKVLVFKPAIDTRYGVG-KVSSRIGLSSEA----   61 (201)
T ss_pred             CEEEEEEEECCCCCCCHHHHHHHHHHHHH---------------CCCEEEEEECCCCCCCCCC-EEEECCCCCCCC----
T ss_conf             44789999715768635999999999997---------------5980899852533535643-365315876653----


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             13768899899999998627807825899889999998864022444746776713532566443211378899999999
Q gi|254780332|r  297 ELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMAL  376 (504)
Q Consensus       297 ~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~l  376 (504)
T Consensus        62 ---------------------~~i~-----~~~~i~~~i~~~~~~~~~~~v~IDEaQF~~~-------------~~v~~l  102 (201)
T COG1435          62 ---------------------VVIP-----SDTDIFDEIAALHEKPPVDCVLIDEAQFFDE-------------ELVYVL  102 (201)
T ss_pred             ---------------------EECC-----CHHHHHHHHHHCCCCCCCCEEEEEHHHHCCH-------------HHHHHH
T ss_conf             ---------------------5638-----7578999998513478757899961671897-------------899999


Q ss_pred             HHHHHHHCCCEEEEEECCCC
Q ss_conf             99998827919997713822
Q gi|254780332|r  377 KALAKELNIPIIALSQLSRQ  396 (504)
Q Consensus       377 K~lA~e~~ipvi~lsQLnR~  396 (504)
T Consensus       103 ~~lad~lgi~Vi~-~GL~~D  121 (201)
T COG1435         103 NELADRLGIPVIC-YGLDTD  121 (201)
T ss_pred             HHHHHHCCCEEEE-ECCCCC
T ss_conf             9998614988999-544653