HHsearch alignment for GI: 254780332 and conserved domain: COG1855

>COG1855 ATPase (PilT family) [General function prediction only].

Probab=95.15  E-value=0.024  Score=37.34  Aligned_cols=41  Identities=37%  Similarity=0.537  Sum_probs=28.4

Q ss_pred             HHHHHH-HHHC-CCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             377655-6416-7726776213100276999999999985101
Q gi|254780332|r  208 TLDKQM-GGLQ-RSDLIIIAGRPGMGKTSLATNIAYNVADAYK  248 (504)
Q Consensus       208 ~LD~~~-gGl~-~G~l~Viaarpg~GKTalalniA~~~A~~~~  248 (504)
T Consensus       250 ~L~dkl~eRL~eraeGILIAG~PGaGKsTFaqAlAefy~~~Gk  292 (604)
T COG1855         250 GLSDKLKERLEERAEGILIAGAPGAGKSTFAQALAEFYASQGK  292 (604)
T ss_pred             CCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             8798999998864164699569999746899999999986696