HHsearch alignment for GI: 254780332 and conserved domain: COG4987
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].
Probab=95.12 E-value=0.33 Score=28.70 Aligned_cols=125 Identities=18% Similarity=0.279 Sum_probs=60.3
Q ss_pred HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC---CHHHHHHHH--HH
Q ss_conf 7765564167726776213100276999999999985101112333332124797589995852---179998789--99
Q gi|254780332|r 209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEM---SSEQLATRI--IS 283 (504)
Q Consensus 209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEM---s~~el~~R~--is 283 (504)
T Consensus 354 L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~---------------~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~ 418 (573)
T COG4987 354 LKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAW---------------DPQQGSITLNGVEIASLDEQALRETISVLT 418 (573)
T ss_pred HHCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCC---------------CCCCCEEEECCCCHHHCCHHHHHHHHHHHC
T ss_conf 10565132588768887799987899999997235---------------878873657886733188366899875412
Q ss_pred HHHHHCC----CCC--CCCCCCHHHHHHHHHHH---HHHH----HCCEEEECCC-CCCHHHHHH--HHHHHCCCCCCCEE
Q ss_conf 9874101----100--01213768899899999---9986----2780782589-988999999--88640224447467
Q gi|254780332|r 284 EQTEVPS----SKI--RRGELTRPDYEKIVACS---QVMQ----KLPLYIDQTG-GISMSQLAT--RARRLKRQRGLDLL 347 (504)
Q Consensus 284 ~~s~I~~----~~i--~~g~l~~~e~~~i~~a~---~~l~----~~~l~I~d~~-~~ti~~I~~--~~r~~~~~~gi~~v 347 (504)
T Consensus 419 Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL--~dapl~ 496 (573)
T COG4987 419 QRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALL--HDAPLW 496 (573)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCHHHHHCHHCCCCCCCCCHHHHHHHHHHHHH--CCCCEE
T ss_conf 321777778998773059999889999999981879998747353422222599747813899999999997--079868
Q ss_pred EEC
Q ss_conf 767
Q gi|254780332|r 348 IVD 350 (504)
Q Consensus 348 vID 350 (504)
T Consensus 497 lLD 499 (573)
T COG4987 497 LLD 499 (573)
T ss_pred EEC
T ss_conf 844