HHsearch alignment for GI: 254780332 and conserved domain: KOG0780
>KOG0780 consensus.
Probab=95.19 E-value=0.31 Score=28.85 Aligned_cols=94 Identities=22% Similarity=0.251 Sum_probs=49.0
Q ss_pred HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHH--HHHHHHHHHHHCC
Q ss_conf 56416772677621310027699999999998510111233333212479758999585217999--8789999874101
Q gi|254780332|r 213 MGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQL--ATRIISEQTEVPS 290 (504)
Q Consensus 213 ~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el--~~R~is~~s~I~~ 290 (504)
T Consensus 95 ~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kk---------------kG~K~~LvcaDTFRagAfDQLkqnA~k~~iP~ 159 (483)
T KOG0780 95 QPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKK---------------KGYKVALVCADTFRAGAFDQLKQNATKARVPF 159 (483)
T ss_pred CCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHH---------------CCCCEEEEEECCCCCCHHHHHHHHHHHHCCEE
T ss_conf 615689708999830578863008999999984---------------68724577602245306899998767407706
Q ss_pred CCCCCCCCCHHHHHHH-HHHHHHHHHC--CEEEECCCC
Q ss_conf 1000121376889989-9999998627--807825899
Q gi|254780332|r 291 SKIRRGELTRPDYEKI-VACSQVMQKL--PLYIDQTGG 325 (504)
Q Consensus 291 ~~i~~g~l~~~e~~~i-~~a~~~l~~~--~l~I~d~~~ 325 (504)
T Consensus 160 yg----syte~dpv~ia~egv~~fKke~fdvIIvDTSG 193 (483)
T KOG0780 160 YG----SYTEADPVKIASEGVDRFKKENFDVIIVDTSG 193 (483)
T ss_pred EE----CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 84----03665558999999998886397289982787