HHsearch alignment for GI: 254780332 and conserved domain: PRK03846

Probab=93.61  E-value=0.66  Score=26.35  Aligned_cols=105  Identities=14%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             64167726776213100276999999999985101112333332124797589995852179998789999874101100
Q gi|254780332|r  214 GGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKI  293 (504)
Q Consensus       214 gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i  293 (504)
T Consensus        20 ~~~-kg~viWlTGLSGSGKTTlA~~L~~~L~~---------------~~~~~~~L----DGD~lR~-~l~~dl-------   71 (198)
T PRK03846         20 HGH-KGVVLWFTGLSGSGKSTVAGALEEALHE---------------LGVHTYLL----DGDNVRH-GLCSDL-------   71 (198)
T ss_pred             HCC-CCEEEEEECCCCCCHHHHHHHHHHHHHH---------------CCCCEEEE----CHHHHHH-HHCCCC-------
T ss_conf             689-9869998799999889999999999997---------------59975997----7799987-436678-------


Q ss_pred             CCCCCCHHHH----HHHHHHHHHHHHCCEEEECCCCCC-HHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf             0121376889----989999999862780782589988-99999988640224447467767
Q gi|254780332|r  294 RRGELTRPDY----EKIVACSQVMQKLPLYIDQTGGIS-MSQLATRARRLKRQRGLDLLIVD  350 (504)
Q Consensus       294 ~~g~l~~~e~----~~i~~a~~~l~~~~l~I~d~~~~t-i~~I~~~~r~~~~~~gi~~vvID  350 (504)
T Consensus        72 ---gfs~~dR~~n~~r~~~lak~l~~~G~iVIv-s~Isp~~~~R~~~R~~~~~~~f~EIyl~  129 (198)
T PRK03846         72 ---GFSDADRKENIRRVGEVAKLMVDAGLVVLT-AFISPHRAERQMVRERLGEGEFIEVFVD  129 (198)
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHHHCCCEEEE-CCCCCCHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             ---989999999999999999999858983664-1478879999999986787757999943