HHsearch alignment for GI: 254780332 and conserved domain: PRK05595

>PRK05595 replicative DNA helicase; Provisional.
Probab=100.00  E-value=0  Score=925.78  Aligned_cols=441  Identities=38%  Similarity=0.625  Sum_probs=416.8

Q ss_pred             CHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHC
Q ss_conf             01026789978999999999832978999999442966637988899999999999839986864388897317983235
Q gi|254780332|r   17 SSQYRESPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGEL   96 (504)
Q Consensus        17 ~~~~~~~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~i   96 (504)
T Consensus         2 ~~p~r~~P~~~eaE~aVLGalL~~~~~~~~v~~~L~~edFy~~~H~~IF~ai~~L~~~g~~iD~vtv~~~L~~~~~l~~i   81 (444)
T PRK05595          2 DAPMKSMPQSIEAEQSVLGAMIIDKTSIAQAAEVLNSEDFYRDSHKIIFSAIIELYQKDIAVDMLTLTENLKSTDKLEAV   81 (444)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHC
T ss_conf             98768999989999999999991956899999515988779889999999999999779998899999999756981211


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             94899999996221122236778787899999999987655677512344453156668765544443201134466543
Q gi|254780332|r   97 TVPQYLARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFH  176 (504)
Q Consensus        97 gg~~yL~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~  176 (504)
T Consensus        82 Gg~~yL~~L~~~~~s~an~~~ya~iV~e~~~~R~li~~~~~i~~~a~~~~~--~~~~~l~~ae~~l~~i~~~~-~~~~~~  158 (444)
T PRK05595         82 GGVTYITELSNSVVSTANIQSYIKIVKDKSTLRKLIKSSTEIIENCYNNQD--NVEKVIDSAEKKIFDISEKR-TSSDFE  158 (444)
T ss_pred             CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHCC-CCCCCE
T ss_conf             649999999862886799999999999999999999999999987326766--79999999999999987425-667855


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             01343367789999987411236644321013776556416772677621310027699999999998510111233333
Q gi|254780332|r  177 TFSDAMTVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGS  256 (504)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~  256 (504)
T Consensus       159 ~~~d~l~~~~~~ie~~~~~~~~~~Gi~TGf~~LD~~t~Gl~~GdLiiiaaRP~mGKTa~alnia~~~a~~----------  228 (444)
T PRK05595        159 PLSNVLERGFEQIENLFNNKGETTGVASGFRELDAKTSGFQKGDMILIAARPSMGKTTFALNIAEYAALR----------  228 (444)
T ss_pred             EHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH----------
T ss_conf             5999999999999999708999677658847699874599857779998579898079999999999986----------


Q ss_pred             CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf             21247975899958521799987899998741011000121376889989999999862780782589988999999886
Q gi|254780332|r  257 YKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRAR  336 (504)
Q Consensus       257 ~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r  336 (504)
T Consensus       229 ----~g~~V~~fSlEMs~~ql~~R~ls~~s~i~~~~i~~g~l~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r  304 (444)
T PRK05595        229 ----EGKSVVIFSLEMSKEQLAYKLLCSEANVDMLRLRTGNLEDKDWENIARASGPLAAAKIYIDDTAGVSVMEMRSKCR  304 (444)
T ss_pred             ----CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             ----6993799958899999999999964698844232689799999999999999854897054899964899999999


Q ss_pred             HHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             40224447467767135325664432113788999999999999882791999771382201689999840101432422
Q gi|254780332|r  337 RLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSI  416 (504)
Q Consensus       337 ~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~I  416 (504)
T Consensus       305 ~~~~~~~~~liiiDYlqLi~~~~~-~~~r~~ev~~isr~LK~lAkel~ipvi~lsQLnR~~e~R~dkrP~lsDLReSG~I  383 (444)
T PRK05595        305 RLKIEHGIDLILIDYLQLMSGGKS-SESRQQEVSEISRSIKALAKEMECPVIALSQLSRAPEQRADHRPMLSDLRESGSI  383 (444)
T ss_pred             HHHHHCCCCEEEEEHHHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             999873999899823763578988-8889999999999999999996997999702685411279999761010122303


Q ss_pred             HHHCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCC
Q ss_conf             331387889725566164423333222111000000112338838999974089972599999746854020077446
Q gi|254780332|r  417 EQDADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALSDSS  494 (504)
Q Consensus       417 EqdAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~~~~  494 (504)
T Consensus       384 EqdAD~v~~l~R~~~y~~~~~-------------------~~~~~elivaKnR~G~~G~v~~~f~~~~~rF~~~~~~~  442 (444)
T PRK05595        384 EQDADLVMFLYRDEYYNKETE-------------------DKNVAECIIAKQRNGPTGTVKLAWLGQYSKFGNLDVIH  442 (444)
T ss_pred             HHHCCEEEEECCHHHCCCCCC-------------------CCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCC
T ss_conf             543768989654421488877-------------------78825899980688996159999865868631654211