HHsearch alignment for GI: 254780332 and conserved domain: PRK05595
>PRK05595 replicative DNA helicase; Provisional.
Probab=100.00 E-value=0 Score=925.78 Aligned_cols=441 Identities=38% Similarity=0.625 Sum_probs=416.8
Q ss_pred CHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHC
Q ss_conf 01026789978999999999832978999999442966637988899999999999839986864388897317983235
Q gi|254780332|r 17 SSQYRESPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGEL 96 (504)
Q Consensus 17 ~~~~~~~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~i 96 (504)
T Consensus 2 ~~p~r~~P~~~eaE~aVLGalL~~~~~~~~v~~~L~~edFy~~~H~~IF~ai~~L~~~g~~iD~vtv~~~L~~~~~l~~i 81 (444)
T PRK05595 2 DAPMKSMPQSIEAEQSVLGAMIIDKTSIAQAAEVLNSEDFYRDSHKIIFSAIIELYQKDIAVDMLTLTENLKSTDKLEAV 81 (444)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHC
T ss_conf 98768999989999999999991956899999515988779889999999999999779998899999999756981211
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 94899999996221122236778787899999999987655677512344453156668765544443201134466543
Q gi|254780332|r 97 TVPQYLARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFH 176 (504)
Q Consensus 97 gg~~yL~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~ 176 (504)
T Consensus 82 Gg~~yL~~L~~~~~s~an~~~ya~iV~e~~~~R~li~~~~~i~~~a~~~~~--~~~~~l~~ae~~l~~i~~~~-~~~~~~ 158 (444)
T PRK05595 82 GGVTYITELSNSVVSTANIQSYIKIVKDKSTLRKLIKSSTEIIENCYNNQD--NVEKVIDSAEKKIFDISEKR-TSSDFE 158 (444)
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHCC-CCCCCE
T ss_conf 649999999862886799999999999999999999999999987326766--79999999999999987425-667855
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 01343367789999987411236644321013776556416772677621310027699999999998510111233333
Q gi|254780332|r 177 TFSDAMTVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGS 256 (504)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~ 256 (504)
T Consensus 159 ~~~d~l~~~~~~ie~~~~~~~~~~Gi~TGf~~LD~~t~Gl~~GdLiiiaaRP~mGKTa~alnia~~~a~~---------- 228 (444)
T PRK05595 159 PLSNVLERGFEQIENLFNNKGETTGVASGFRELDAKTSGFQKGDMILIAARPSMGKTTFALNIAEYAALR---------- 228 (444)
T ss_pred EHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH----------
T ss_conf 5999999999999999708999677658847699874599857779998579898079999999999986----------
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
Q ss_conf 21247975899958521799987899998741011000121376889989999999862780782589988999999886
Q gi|254780332|r 257 YKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRAR 336 (504)
Q Consensus 257 ~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r 336 (504)
T Consensus 229 ----~g~~V~~fSlEMs~~ql~~R~ls~~s~i~~~~i~~g~l~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r 304 (444)
T PRK05595 229 ----EGKSVVIFSLEMSKEQLAYKLLCSEANVDMLRLRTGNLEDKDWENIARASGPLAAAKIYIDDTAGVSVMEMRSKCR 304 (444)
T ss_pred ----CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf ----6993799958899999999999964698844232689799999999999999854897054899964899999999
Q ss_pred HHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 40224447467767135325664432113788999999999999882791999771382201689999840101432422
Q gi|254780332|r 337 RLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSI 416 (504)
Q Consensus 337 ~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~I 416 (504)
T Consensus 305 ~~~~~~~~~liiiDYlqLi~~~~~-~~~r~~ev~~isr~LK~lAkel~ipvi~lsQLnR~~e~R~dkrP~lsDLReSG~I 383 (444)
T PRK05595 305 RLKIEHGIDLILIDYLQLMSGGKS-SESRQQEVSEISRSIKALAKEMECPVIALSQLSRAPEQRADHRPMLSDLRESGSI 383 (444)
T ss_pred HHHHHCCCCEEEEEHHHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 999873999899823763578988-8889999999999999999996997999702685411279999761010122303
Q ss_pred HHHCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCC
Q ss_conf 331387889725566164423333222111000000112338838999974089972599999746854020077446
Q gi|254780332|r 417 EQDADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALSDSS 494 (504)
Q Consensus 417 EqdAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~~~~ 494 (504)
T Consensus 384 EqdAD~v~~l~R~~~y~~~~~-------------------~~~~~elivaKnR~G~~G~v~~~f~~~~~rF~~~~~~~ 442 (444)
T PRK05595 384 EQDADLVMFLYRDEYYNKETE-------------------DKNVAECIIAKQRNGPTGTVKLAWLGQYSKFGNLDVIH 442 (444)
T ss_pred HHHCCEEEEECCHHHCCCCCC-------------------CCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCC
T ss_conf 543768989654421488877-------------------78825899980688996159999865868631654211