HHsearch alignment for GI: 254780332 and conserved domain: PRK05642

>PRK05642 DNA replication initiation factor; Validated.
Probab=94.36  E-value=0.49  Score=27.38  Aligned_cols=38  Identities=21%  Similarity=0.402  Sum_probs=26.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf             26776213100276999999999985101112333332124797589995852
Q gi|254780332|r  220 DLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEM  272 (504)
Q Consensus       220 ~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEM  272 (504)
T Consensus        46 ~~l~i~G~~G~GKTHLL~A~~~~~~~---------------~~~~~~yl~~~~   83 (234)
T PRK05642         46 SLIYLWGKDGVGRSHLLQAACLRFEQ---------------RGEPAVYLPLAE   83 (234)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHH---------------CCCCEEEEEHHH
T ss_conf             83899889999889999999999980---------------799679978999