HHsearch alignment for GI: 254780332 and conserved domain: PRK05973

>PRK05973 replicative DNA helicase; Provisional.
Probab=100.00  E-value=5.3e-41  Score=331.67  Aligned_cols=174  Identities=22%  Similarity=0.393  Sum_probs=143.5

Q ss_pred             HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             77655641677267762131002769999999999851011123333321247975899958521799987899998741
Q gi|254780332|r  209 LDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEV  288 (504)
Q Consensus       209 LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I  288 (504)
T Consensus        54 a~~l~~gLqPGDLIIlAARPsMGKTafaLnla~~A~k---------------~g~~v~fFSLEM~~~ql~~RL~~~~~~-  117 (237)
T PRK05973         54 AEELFGQLRPGDLVLLGARPGQGKTLLGLELAVEAMK---------------SGRTGVFFTLEYTEKDVLDRLRALGVD-  117 (237)
T ss_pred             HHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH---------------HCCCEEEEEECCCHHHHHHHHHHCCCC-
T ss_conf             8998568998677999428988789999999999999---------------599669996159999999999972778-


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHH
Q ss_conf             01100012137688998999999986278078258998899999988640224447467767135325664432113788
Q gi|254780332|r  289 PSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLE  368 (504)
Q Consensus       289 ~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~  368 (504)
T Consensus       118 ---~--------~~-----------~~~~~~iD~sd~i~~~~i---~rrl~~~~~~~LIVIDYLQLM~~-----~r~~~e  167 (237)
T PRK05973        118 ---R--------AQ-----------FADLFEFDTSDAICADYI---IARLASAPRGTLVVIDYLQLLDQ-----RREKPD  167 (237)
T ss_pred             ---H--------HH-----------CCCCCEECCCHHHHHHHH---HHHHHHCCCCCEEEEECHHHHCC-----CCCCCC
T ss_conf             ---3--------34-----------067510038303339999---99985278996899976775266-----778866


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH-HHCCEEEEEEC
Q ss_conf             9999999999998827919997713822016899998401014324223-31387889725
Q gi|254780332|r  369 ITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIE-QDADVVLFVIR  428 (504)
Q Consensus       369 i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IE-qdAD~v~~l~R  428 (504)
T Consensus       168 iseisRsLK~lAkEl~vPVvaLSQLnRs~E~R~dKrP~lSDLRlpnp~dl~lf~k~~fl~~  228 (237)
T PRK05973        168 LSVQVRALKSFARKRGVILVFISQIDRSFDPASKPLPDIRDVRLPNPLDLSLFDKACFLNN  228 (237)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHEEECC
T ss_conf             8999999999999869939994003643223567899740136998210423032103127