HHsearch alignment for GI: 254780332 and conserved domain: PRK06749

>PRK06749 replicative DNA helicase; Provisional.
Probab=100.00  E-value=0  Score=863.62  Aligned_cols=423  Identities=34%  Similarity=0.525  Sum_probs=382.3

Q ss_pred             CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCHHHHH
Q ss_conf             89978999999999832978999999442966637988899999999999839986864388897317983235948999
Q gi|254780332|r   23 SPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGELTVPQYL  102 (504)
Q Consensus        23 ~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~igg~~yL  102 (504)
T Consensus         2 ~~hniEAEqaVLGalLld~~~i~~v--~L~~e~Fy~~~H~~If~ai~~L~~~g~piD~vTv~~~L~~-~~L~~iGG~~yL   78 (428)
T PRK06749          2 SIQNVEAEKTVLGSLLLDGELIKEC--RLTEQYFSMPVHKSIFQLMRKMEDEGQPIDLVTFISRVDP-NFLKGIGGMEYF   78 (428)
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCEEE--EECHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC-CCHHHCCCHHHH
T ss_conf             8547999999999998280400015--4087887978899999999999977999889999998754-335443879999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf             99996221122236778787899999999987655677512344453156668765544443201134466543013433
Q gi|254780332|r  103 ARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFHTFSDAM  182 (504)
Q Consensus       103 ~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~~~~~~~  182 (504)
T Consensus        79 ~~L~~~~ps~an~~~Ya~iVke~~~~R~l~~~~~~~~~~~~~~----~~~~~i~~~~~~l~~~~~~~~~--~~~~~~~~l  152 (428)
T PRK06749         79 IGLMDGVPTTSNFSYYEGLVRGAWKMYQAGVLGHKMGERLIAE----KDEKIIGETITALCELEEKDCV--CEFDLKDAL  152 (428)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHCCCCC--CCCCHHHHH
T ss_conf             9999718877889999999999999999999999999876346----1578999999999998624876--754289999


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             67789999987411236644321013776556416772677621310027699999999998510111233333212479
Q gi|254780332|r  183 TVAIDMAGQAFNRDGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTING  262 (504)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g  262 (504)
T Consensus       153 ~~~~---e~~~~~~~~~~Gi~TGf~~LD~lt~Gl~~g~LiviaaRPsmGKTa~alnia~~~a~---------------~g  214 (428)
T PRK06749        153 VDLY---EELHQDVKEITGIETGYTSLNKMTCGLQEGDFVVLGARPSMGKTAFALNVGLHAAK---------------SG  214 (428)
T ss_pred             HHHH---HHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH---------------CC
T ss_conf             9999---99984649987687783889875249998868999627989768999999999996---------------49


Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf             75899958521799987899998741011000121--3768899899999998627807825899889999998864022
Q gi|254780332|r  263 GIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGE--LTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKR  340 (504)
Q Consensus       263 ~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~--l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~  340 (504)
T Consensus       215 ~~v~~fSlEMs~~~l~~R~ls~~s~v~~~~i~~~~~~~~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r~~~~  294 (428)
T PRK06749        215 AAVGLFSLEMSSKQLLKRMASCVGEVSGGRLKNPKHRFAMEDWEKVSKAFAEIGELPLEIYDNAGVTVQDIWMQTRKLKR  294 (428)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             92799837899999999999975499888862776779999999999999998559659975899767999999999999


Q ss_pred             CCCCC--EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             44474--6776713532566443211378899999999999988279199977138220168999984010143242233
Q gi|254780332|r  341 QRGLD--LLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQ  418 (504)
Q Consensus       341 ~~gi~--~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEq  418 (504)
T Consensus       295 ~~g~~~~livIDYlqLi~~~~~~~~~r~~ev~~isr~lK~lAkel~vpvi~lsQLnR~~e~r~dkrP~lsDLreSG~IEq  374 (428)
T PRK06749        295 KHGDKKVLIIVDYLQLITGDPKHKGNRFQEISEISRKLKLLARELNVCVVALSQLSRSVESRQDKRPLLSDLRETGQIEQ  374 (428)
T ss_pred             HCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHH
T ss_conf             74998769997677650578777778999999999999999999699899971378552337899976012103330244


Q ss_pred             HCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECC
Q ss_conf             1387889725566164423333222111000000112338838999974089972599999746854020077
Q gi|254780332|r  419 DADVVLFVIRDEYYIRNKEPTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALS  491 (504)
Q Consensus       419 dAD~v~~l~R~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~  491 (504)
T Consensus       375 dAD~v~~l~R~~~y~~~~~-------------------~~~~~eiivaKnR~G~~G~v~~~f~~~~~~F~~~e  428 (428)
T PRK06749        375 DADVIMLMYREDYYDKETM-------------------QKEMTEIHVAKHRNGPVGSFKLRFLKEFGRFVEGE  428 (428)
T ss_pred             HCCEEEEECCHHHCCCCCC-------------------CCCCEEEEEECCCCCCCCEEEEEEECCCCEEECCC
T ss_conf             2778999724310487767-------------------88825999972589997069999976867131789