HHsearch alignment for GI: 254780332 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=95.08 E-value=0.039 Score=35.68 Aligned_cols=43 Identities=28% Similarity=0.453 Sum_probs=32.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHH
Q ss_conf 26776213100276999999999985101112333332124797589995852179998789
Q gi|254780332|r 220 DLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRI 281 (504)
Q Consensus 220 ~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~ 281 (504)
T Consensus 184 ~nLlf~G~~G~GKTfLa~~IA~ell~---------------~g~sViy~ta----~~L~~~l 226 (330)
T PRK06835 184 ENLLFYGNTGTGKTFLSNCIAKELLD---------------RGKTVIYRTS----DELIENL 226 (330)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHH---------------CCCEEEEEEH----HHHHHHH
T ss_conf 86698899999889999999999998---------------7994999629----9999999