HHsearch alignment for GI: 254780332 and conserved domain: PRK08506

>PRK08506 replicative DNA helicase; Provisional.
Probab=100.00  E-value=0  Score=921.00  Aligned_cols=453  Identities=35%  Similarity=0.573  Sum_probs=408.7

Q ss_pred             CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCHHH
Q ss_conf             67899789999999998329789999994429666379888999999999998399868643888973179832359489
Q gi|254780332|r   21 RESPNNIEAEQALLGAILVNNEAFYRVSDFLKPLHFFEAIHQKIFEIMGKLVHMGKTANPVTVKTFLSDQDMLGELTVPQ  100 (504)
Q Consensus        21 ~~~P~n~eaE~aVLG~lL~~p~~~~~v~~~L~pedFy~~~hr~IF~ai~~L~~~g~~iD~itl~~~L~~~~~l~~igg~~  100 (504)
T Consensus         2 ~~~l~nieAEqaVLGalL~~~~~~~~v~~~L~~edFy~~~H~~If~ai~~L~~~~~piD~vtl~~~L~~~~~l~~----~   77 (473)
T PRK08506          2 QQNLYDLDIERSVLSSIVFSPEAFEEIAGVLEPKDFYLPAHQDIFEAMIKLHNEDEPIDEEFIRKKLPKDKKIDE----E   77 (473)
T ss_pred             CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH----H
T ss_conf             987668999999999998597389999831798778988999999999999967998889999999874687437----6


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             99999962211222367787878999999999876556775123444531566687655444432011344665430134
Q gi|254780332|r  101 YLARLASEAVSIINTEDYGRIIYGLALRRTLITIGEEMVNAAYEASLDKSPSIQIEEAERKLFHLAENGRYDGGFHTFSD  180 (504)
Q Consensus       101 yL~~L~~~~~s~~n~~~ya~~Ike~~~~R~li~~~~~i~~~a~~~~~~~~~~~~l~~~e~~l~~i~~~~~~~~~~~~~~~  180 (504)
T Consensus        78 ~l~~~~~-~~s~ani~~Ya~iV~e~s~~R~li~~~~~i~~~a~~~~--~~~~~~l~~ae~~l~~i~~~~-~~~~~~~~~~  153 (473)
T PRK08506         78 ILLEILA-ANPIINIEAYVEEIKEKSIKRKLLSLANTIPEQAVEED--QASSDILDEVERELYSITNGS-NSEDFKDSKE  153 (473)
T ss_pred             HHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHCC-CCCCCCCHHH
T ss_conf             6877632-78688899999999999999999999999999854479--989999999999999998257-8788512999


Q ss_pred             HHHHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             336778999998741-1236644321013776556416772677621310027699999999998510111233333212
Q gi|254780332|r  181 AMTVAIDMAGQAFNR-DGRLAGVSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKT  259 (504)
Q Consensus       181 ~~~~~~~~~~~~~~~-~~~~~Gi~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~  259 (504)
T Consensus       154 ~~~~~~~~i~~~~~~~~~~~~Gi~TGf~~LD~~t~Gl~~gdLiIIAARPsmGKTAfAlniA~~~a~--------------  219 (473)
T PRK08506        154 VIKSTMEHIKKQKRLGNKDIIGLDTGFKQLNKMTKGFNKGDLIIIAARPSMGKTTLVLNMVLKALN--------------  219 (473)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH--------------
T ss_conf             999999999999855899853477880878887269985627999507998678999999999996--------------


Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             47975899958521799987899998741011000121376889989999999862780782589988999999886402
Q gi|254780332|r  260 INGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLK  339 (504)
Q Consensus       260 ~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~  339 (504)
T Consensus       220 -~~~~V~~FSLEMs~~ql~~Rlls~~s~V~~~~lr~g~l~~~e~~~~~~a~~~l~~~~l~IdD~~~lti~~Ira~~Rr~k  298 (473)
T PRK08506        220 -QGKGVAFFSLEMPAEQLMLRMLSAKTSIPLQNLRTGDLDDDEWENLSDACDELSQKKLFVYDSGYVNIHQVRAQLRKLK  298 (473)
T ss_pred             -CCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             -5996589822479999999999972887831000689999999999999999865988998899999999999999999


Q ss_pred             CCCC-CCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             2444-746776713532566443211378899999999999988279199977138220168999984010143242233
Q gi|254780332|r  340 RQRG-LDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQ  418 (504)
Q Consensus       340 ~~~g-i~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEq  418 (504)
T Consensus       299 ~~~~~l~livIDYLQLm~~~~~-~~~R~~ev~~ISr~LK~lAkEl~vPViaLSQLnR~vE~R~dkrP~lSDLReSGsIEQ  377 (473)
T PRK08506        299 SQHPEIGLAVIDYLQLMSGSKN-FKDRHLQISEISRGLKLLARELDIPIIALSQLNRSLESRADKRPMLSDLRESGAIEQ  377 (473)
T ss_pred             HHCCCCCEEEEEHHHHCCCCCC-CCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             9769987899636755468887-530889999999999999999699799970368765557899876001134331354


Q ss_pred             HCCEEEEEECHHHCCCCCCCCCCCCCCCC---CCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCC
Q ss_conf             13878897255661644233332221110---000001123388389999740899725999997468540200774466
Q gi|254780332|r  419 DADVVLFVIRDEYYIRNKEPTNKDDILAY---TKWQEDLKRVKGIADIIIAKQRHGPTGTVTLAFQAEFTRFSALSDSSY  495 (504)
Q Consensus       419 dAD~v~~l~R~~~y~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~elivaKnR~G~~g~~~~~f~~~~~~f~~~~~~~~  495 (504)
T Consensus       378 DADvV~flyR~~yY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ae~iiaK~RnG~tG~v~l~f~~~~trF~dl~~g~~  457 (473)
T PRK08506        378 DADIILFVYRDDVYKEREEKEKEDKAKKEGKEERRIHKQNKSIEEAEIIIGKNRNGPTGTVKLIFQKEFTRFVDKPIGSE  457 (473)
T ss_pred             HCCEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf             37689996527753665333333321111321112222356777248999657789872599998658777023899987


Q ss_pred             CC
Q ss_conf             77
Q gi|254780332|r  496 QT  497 (504)
Q Consensus       496 ~~  497 (504)
T Consensus       458 ~~  459 (473)
T PRK08506        458 LE  459 (473)
T ss_pred             CC
T ss_conf             30