HHsearch alignment for GI: 254780332 and conserved domain: PRK09700
>PRK09700 D-allose transporter ATP-binding protein; Provisional.
Probab=96.75 E-value=0.02 Score=38.01 Aligned_cols=191 Identities=14% Similarity=0.148 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CC-----CCEEEEEECCCCHH----
Q ss_conf 013776556416772677621310027699999999998510111233333212-47-----97589995852179----
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKT-IN-----GGIVGFYSLEMSSE---- 275 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~-~~-----g~~Vl~fSlEMs~~---- 275 (504)
T Consensus 276 ~~~l~~vsf~v~~GEi~gl~G~nGsGKsTL~~~l~G-l~~~~~G~I~~~G~~i~~~~~~~~~~~gi~~v~~~r~~~~l~~ 354 (510)
T PRK09700 276 RKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFG-VDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFP 354 (510)
T ss_pred CCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHC-CCCCCCEEEEECCEECCCCCHHHHHHCCCEEEEEEHHHCCCCC
T ss_conf 886543357874881899976888628899999819-8888861899999999989989999708677531033247488
Q ss_pred --HHHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHCCE-EEECCC-CCCHHHHH--HHHHHHCCCCCCCEE
Q ss_conf --998789999874101100--0121376889989999999862780-782589-98899999--988640224447467
Q gi|254780332|r 276 --QLATRIISEQTEVPSSKI--RRGELTRPDYEKIVACSQVMQKLPL-YIDQTG-GISMSQLA--TRARRLKRQRGLDLL 347 (504)
Q Consensus 276 --el~~R~is~~s~I~~~~i--~~g~l~~~e~~~i~~a~~~l~~~~l-~I~d~~-~~ti~~I~--~~~r~~~~~~gi~~v 347 (504)
T Consensus 355 ~~sv~en~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~LSGGq~Qrv~iAraL~--~~p~lL 431 (510)
T PRK09700 355 NFSIAQNM-AISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLC--CCPEVI 431 (510)
T ss_pred CCCHHHHH-HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHH--HCCCEE
T ss_conf 99689999-899876421000010136778999999999987188655422881459999999999999998--599889
Q ss_pred EECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf 76713532566443211378899999999999988279199977138220168999984010143242233138788972
Q gi|254780332|r 348 IVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504)
Q Consensus 348 vIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504)
T Consensus 432 ilD-----EPT~G-lD--~~~~~~i~~li~~l~~~-G~tvl~ish----------------d---l~ev~~~~DRi~Vm~ 483 (510)
T PRK09700 432 IFD-----EPTRG-ID--VGAKAEIYKVMRQLADD-GKVILMVSS----------------E---LPEIITVCDRIAVFC 483 (510)
T ss_pred EEE-----CCCCC-CC--HHHHHHHHHHHHHHHHC-CCEEEEEEC----------------C---HHHHHHHCCEEEEEE
T ss_conf 997-----97558-99--99999999999999968-999999907----------------5---899998699999998
Q ss_pred C
Q ss_conf 5
Q gi|254780332|r 428 R 428 (504)
Q Consensus 428 R 428 (504)
T Consensus 484 ~ 484 (510)
T PRK09700 484 E 484 (510)
T ss_pred C
T ss_conf 9