HHsearch alignment for GI: 254780332 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=97.09 E-value=0.014 Score=39.20 Aligned_cols=142 Identities=9% Similarity=0.202 Sum_probs=69.3
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CCCEE--E----------
Q ss_conf 37765564167726776213100276999999999985101112333332124---------79758--9----------
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTI---------NGGIV--G---------- 266 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~---------~g~~V--l---------- 266 (504)
T Consensus 43 Av~dVsl~I~~GEi~~ivG~SGsGKSTLlr~i~g-L~~Pt~G~I~i~G~di~~~~~~~l~~~rrr~igmVFQ~~aL~P~~ 121 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNR-LIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEECCEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCCCCCEEEECCEECCCCCHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf 8974076887999999999998469999999975-999898189999999998997898765146559995797414388
Q ss_pred ------EEECC---CCHHHHHHHHHHHHHHHCCCCCCC--C-CCCHHHHHHHHHHHHHHHHCCEEEECCCCCCH-----H
Q ss_conf ------99585---217999878999987410110001--2-13768899899999998627807825899889-----9
Q gi|254780332|r 267 ------FYSLE---MSSEQLATRIISEQTEVPSSKIRR--G-ELTRPDYEKIVACSQVMQKLPLYIDQTGGISM-----S 329 (504)
Q Consensus 267 ------~fSlE---Ms~~el~~R~is~~s~I~~~~i~~--g-~l~~~e~~~i~~a~~~l~~~~l~I~d~~~~ti-----~ 329 (504)
T Consensus 122 TV~eNi~~~l~~~~~~~~e~~~ra~e~L~~VgL~~~~~~yP~eLSGGqqQRVaiARALa~~P~iLL~DEP~SALDp~~r~ 201 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRT 201 (400)
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
T ss_conf 88887878999849998999999999999749902421893448999999999999986299999970876545989999
Q ss_pred HHHHHHHHHCCCCCCCEEEEC
Q ss_conf 999988640224447467767
Q gi|254780332|r 330 QLATRARRLKRQRGLDLLIVD 350 (504)
Q Consensus 330 ~I~~~~r~~~~~~gi~~vvID 350 (504)
T Consensus 202 ~i~~~l~~L~~~~~~TiifVT 222 (400)
T PRK10070 202 EMQDELVKLQAKHQRTIVFIS 222 (400)
T ss_pred HHHHHHHHHHHHHCCEEEEEC
T ss_conf 999999999998599999989